Gene Paes_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1831 
Symbol 
ID6460240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1998898 
End bp2000061 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content49% 
IMG OID642725815 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_002016490 
Protein GI194334630 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCG CAACCTGTCT TCCTGCAGAG TCAGCACTCC TTACAGCGGC GTCTTGCTTG 
CAGACTTTTG ACTTCAGACT TTTGAAACGC ATCGACACCT ACATAGCCCG TCAGTTCGGC
CTGACATGTA TTTTTGCCAG TCTGAGCTTT CTTGCCCTCT TTGTCGTTCT TGACCTGATT
GAAAATATCG ATCGGTTTAT CGACAACAGT GTCGACATAC AGCACATTTC TCTCTACTAC
CTGAGCTTTC TGCCCGAAGT CTTTCTTGCA ACGACGCCGA TTGCCGTCCT GCTCTCATCC
CTGTATGTTA CAGGCCGGCT TTCAAGCTCC AGCGAGCTTT CTGCCATCTT TTCGGCAGGA
TTGAGCCTGC GCCGCATCAT GCTCCCCTTC GCTTTCGTCA GCCTTGTCAT CACGGTTTTC
AATATCGTCA ATGCCGGATG GATCCTGCCG GAAACGACTG CCTATAAAAA CACCTTCATG
AGAGAGTTTT TAGGAAAAAA CAGTGAGCAT CTCTTTCCGG AAAGCCGCAT ACATATTCTC
GAGTCCAGAG ACAGGATACT CTCGATCGGC AAGCTTGAGC CAAACACCGG ACAGGCTGAA
AAGATCACGC TGGAAACCTT CGATGGTTCG ACAATAACGC AACGTATCGA TGCCGAAAAA
ATGAACTACA ACGCTGACCT TGACCGCTGG ATCATGACCG GCACCAGAAA CAGAACGTTT
CTGCCCGATA CAACCCTTTA CCGCTACGAT CCTGGAAACG ATACCCTGAA GCTTTCCTTG
ACAGCTTCGT CGCTGAAAGA GCTGCATCTC AGGCCTGAGG AAATGAACAT TGTTCAACAC
TATCGATATA TCGAAGAAAA GAAAGATGCA GGCTTTTCCA ACCTGCAGAC GGCCATCATC
GAACTGCACT CGCGCATAGC ACTACCGATA ACCTCACTGA TCATCATTCT CATCGGCGTT
CCGCTTTCAA CAAGAAAAAA ACGGAGCGGA CTGGCTATCG AAGCCGGAAT CAGCATACTC
ATCGGTTTTC TCTACATCAG TCTTGAAAAA ACCATTCATG CGATCGGTAA CGGAGGGATG
GCTGACCCCG TTCTGACAGC CTGGCTGCCG AACATCATCT TCCTCGGTGT AGGAATAGTT
CTCTACAAAA CATCAAAAAC GTGA
 
Protein sequence
MKCATCLPAE SALLTAASCL QTFDFRLLKR IDTYIARQFG LTCIFASLSF LALFVVLDLI 
ENIDRFIDNS VDIQHISLYY LSFLPEVFLA TTPIAVLLSS LYVTGRLSSS SELSAIFSAG
LSLRRIMLPF AFVSLVITVF NIVNAGWILP ETTAYKNTFM REFLGKNSEH LFPESRIHIL
ESRDRILSIG KLEPNTGQAE KITLETFDGS TITQRIDAEK MNYNADLDRW IMTGTRNRTF
LPDTTLYRYD PGNDTLKLSL TASSLKELHL RPEEMNIVQH YRYIEEKKDA GFSNLQTAII
ELHSRIALPI TSLIIILIGV PLSTRKKRSG LAIEAGISIL IGFLYISLEK TIHAIGNGGM
ADPVLTAWLP NIIFLGVGIV LYKTSKT