| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1794 |
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| Symbol | rpsA |
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| ID | 6458803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1959014 |
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| End bp | 1960780 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725779 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002016454 |
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| Protein GI | 194334594 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000217401 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.053041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAA CACAAACAAT CGAACAACCG AAGGTAACTG AGTCAGGTCA CGGTAATCAG
CGGGTCAAAT TTTTTGCAGA GTACGAACTT TCCGAACTTC AGCAGATGGA GAAGCTCTAT
TCGAGCACGC TCAACGAGAT CACTGAAGAA GAGATCGTCA AAGGACGAAT TGTTGGTATT
TCCAACAAAG ACGTCACCAT CGATGTCGGC TACAAATCAG AAGGCATCGT TTCAAAACTT
GAGTTCCGCG ATGAAGATGA GCTCAAAGTC GGCGACGAGG TCGAGGTTTA TCTCGAAAAC
ATCGAAGACA AGATGGGTCA GCTTATTCTC TCCAAGAGGA AAGCAGATGT TCTCAGAATC
TGGGACAAGA TTTACGATTC AATCGAGAAC GATACCATCA TCAACGGAAA GATCATCAAC
CGCGTCAAAG GCGGCATGAC GGTTTCGCTT TCAGGAGTCG AAGCCTTCCT TCCGGGTTCT
CAGATCGATG TCAAGCCCGT CCGCGATTTC GACGCACTCG TCGGTCAGAC CATGGACTTC
AGGGTTGTCA AAATCAATCC GGTCACCCAG AACATCGTTG TCAGTCACAA GGTCATTCTT
GAAGAAGAGT ACGCAGCGAA ACGCGAAGAG ATGCTGGCCA ATATCAAGGT CGGCATGGTT
CTCGAAGGTA CGGTTAAAAA CATCACCGAC TTCGGTATTT TCGTTGATCT TGGCGGTCTT
GACGGTCTTG TTCACATTAC CGATATCACC TGGGGCCGTA TCAACCATCC TTCAGAAGTT
GTCGAACTTG ATCAGCCGAT CAAGGTTGTT GTTGTTGGCT TTGACGAAGA CACCAAGCGT
GTCTCTCTCG GCATGAAGCA GCTCGAGCCT CATCCGTGGG AAAATATCGA GATCAAATAC
CCTGTTGGAA CCAAAACCAA CGGTCGTGTT GTCTCCATTA CCGACTACGG TGCTTTTGTC
GAGATCGAGA AAGGCATCGA GGGTCTTGTT CACATTTCCG AAATGAGCTG GACGCAGCAT
ATCAAGCATC CAAGCCAGTT TGTTTCTCTC GGCCAGGAAG TCGAAGTCGT TATCCTCAAC
ATCGACAAGG ATCACACCAA GCTTTCACTC TCCATGAAAC GCGTCACCGA AGATCCGTGG
ATCGCGCTTT CCGAGAAATA TATCGAAGCG TCCCTGCACA AGGGCACTGT CAGCAACATC
ACCGATTTCG GTGTCTTTGT TGAGCTTGAA CCCGGTGTCG ATGGCCTGGT ACACATTTCA
GACCTCTCAT GGACCAAGAA AATCCGTCAT CCCAGCGAAC TGGTTAAAAA GAATCAGGAT
CTTGAAGTCA AGGTGCTCAA ATTCGACGTC AACGCACGCC GTATCGCCCT TGGTCACAAG
CAGATCAACC CGGATCCATG GGATGAATTC GAGCAGAAAT ACGCAGTCGG CGCCGAATGC
GCAGGCGAGA TCTCCCAGAT CATTGAAAAA GGCGTGATCG TCATCCTTCC TGGTGACGTC
GATGGTTTTG TCCCGGTATC GCACCTGCTT CAGGGCGGTG TCAAGGACAT CCACACCTCA
TTCAAAGTCG GTGATGCACT CCCGCTTCGC GTGATCGAGT TCGACAAAGA GAACAAACGA
ATCATCCTCT CCGCGCTCGA GTACTTCAAA GACAAGAGCA AGGAAGAGAT CGAAGAGTAC
CTGCAGGCTC ATCCGAACGA GAAGAAAGAG ATCGAAGATG CCAGCGCATC ACTCGAATCT
CAGCCAAAAT CCTCGAAAAA GGCCTAA
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| Protein sequence | MSETQTIEQP KVTESGHGNQ RVKFFAEYEL SELQQMEKLY SSTLNEITEE EIVKGRIVGI
SNKDVTIDVG YKSEGIVSKL EFRDEDELKV GDEVEVYLEN IEDKMGQLIL SKRKADVLRI
WDKIYDSIEN DTIINGKIIN RVKGGMTVSL SGVEAFLPGS QIDVKPVRDF DALVGQTMDF
RVVKINPVTQ NIVVSHKVIL EEEYAAKREE MLANIKVGMV LEGTVKNITD FGIFVDLGGL
DGLVHITDIT WGRINHPSEV VELDQPIKVV VVGFDEDTKR VSLGMKQLEP HPWENIEIKY
PVGTKTNGRV VSITDYGAFV EIEKGIEGLV HISEMSWTQH IKHPSQFVSL GQEVEVVILN
IDKDHTKLSL SMKRVTEDPW IALSEKYIEA SLHKGTVSNI TDFGVFVELE PGVDGLVHIS
DLSWTKKIRH PSELVKKNQD LEVKVLKFDV NARRIALGHK QINPDPWDEF EQKYAVGAEC
AGEISQIIEK GVIVILPGDV DGFVPVSHLL QGGVKDIHTS FKVGDALPLR VIEFDKENKR
IILSALEYFK DKSKEEIEEY LQAHPNEKKE IEDASASLES QPKSSKKA
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