Gene Paes_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1792 
Symbol 
ID6458810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1956537 
End bp1957760 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content46% 
IMG OID642725777 
Productrod shape-determining protein RodA 
Protein accessionYP_002016452 
Protein GI194334592 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.20178e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0217876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT ATAACACGTT GGATGGATGG TTACTCGGTT TAATGTTTGG TTTGATATTT 
TTAGGGCTGA TGGCTATCTA CAGTGCAAGT AACGGTGTAG GATCTGTCGA TCTTTTTTAT
AAGCAGCTTA TGTGGTTTGG TATCGGACTG ATCGTCATGG CGATGGTCTA TTATCTTGAT
ACGAATATCA TTAAGGAGTA TGTTGTCGTT TATTATATCA TAGGGTTGAT CTTTCTTGTT
CTCGTGTTAC TTTTCGGTAC AAAAGTCGCC GGTGCAACCA GTTGGGTCAG GATCGGTTTT
ATCAGTATTC AGCCGTCAGA GATCGCAAAA GTCACGACCA TTCTCATGCT GGCAAAGTAC
CTTGCCACTG ACGATACCGA TATCACATCT CCCCGTCATA TTCTTATAGC CATCGCCATA
GCTGTTGTGC CGGCAATGCT TGTTATGCTG CAGCCTGATA TGGGCACAAC TCTCACCTAC
CTTTCCTATC TCTTTCCGGT CATGATTATG GCAGGTTTCA ATGCCTACTA TCTCATGTTG
TTCGGTGTTC CTGTTCTGCT CACTGTTATC GGTTTTTTCA ATATTTATCT TCTTCTCATT
TTCGCTCTCT CCAGCCTTGT CGTACTCTTT CTCATCAAGC GAAGACTCTA TTTCTCACAT
TTTTTGGTGA CAGCTCTCGG TTTAGCAGGA GGCTTATTTA CTCTCAACTC CGCATCGAAA
ATTCTTCAGC CACACCAGAT GAAACGTATA CAAACATTTC TGGATCCGAT GTCCGATCCT
CTCGGTGCAG GCTACAACGC TCTCCAGGCA AAAATCGCTA TCGGCTCAGG AGGATTTTTC
GGCAAAGGGT TTCTGGAGGG GACCCAGACC CAGTTACGCT TTATACCCGC TCAGTGGACT
GACTTTATTT TCTGTGTTAT CGGTGAAGAG CTCGGCCTTC TCGGGGCGAT CGTTCTGCTC
AGCCTCTTTC TGGCGCTTTT GCTCAGATTG CTCTGGATGG TCAGTGTCAT CAAAAATAAA
TTCGTCGAGC TAACCCTTGT CGGCTTCGTC TCGCTCCTCC TCGTCCATGT CATGATCAAC
ATCGGCATGA CCATCGGTCT TTTTCCCGTC ATCGGCGTTC CACTCCCATT CCTCTCCTAC
GGAGGATCCT CACTCCTCGG CAACATGCTC ATGGTAGCCC TCGCACTCAA CTTCAACCGC
AACAAACGCA ATCTCGGGTA TTGA
 
Protein sequence
MNQYNTLDGW LLGLMFGLIF LGLMAIYSAS NGVGSVDLFY KQLMWFGIGL IVMAMVYYLD 
TNIIKEYVVV YYIIGLIFLV LVLLFGTKVA GATSWVRIGF ISIQPSEIAK VTTILMLAKY
LATDDTDITS PRHILIAIAI AVVPAMLVML QPDMGTTLTY LSYLFPVMIM AGFNAYYLML
FGVPVLLTVI GFFNIYLLLI FALSSLVVLF LIKRRLYFSH FLVTALGLAG GLFTLNSASK
ILQPHQMKRI QTFLDPMSDP LGAGYNALQA KIAIGSGGFF GKGFLEGTQT QLRFIPAQWT
DFIFCVIGEE LGLLGAIVLL SLFLALLLRL LWMVSVIKNK FVELTLVGFV SLLLVHVMIN
IGMTIGLFPV IGVPLPFLSY GGSSLLGNML MVALALNFNR NKRNLGY