| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1782 |
|---|
| Symbol | |
|---|
| ID | 6458853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1945623 |
|---|
| End bp | 1946600 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642725767 |
|---|
| Product | protein of unknown function DUF1568 |
|---|
| Protein accession | YP_002016442 |
|---|
| Protein GI | 194334582 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0188832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAG GAGCGAGACT CGATAGCCCA GGAACCCTTC ACCACGTCAT GATGAGAGGC
ATTGAAAAAA GCCTGATTTT TTATGACGAC CATGATCGGA GAATGATGCT GAAAAAAATC
GGCTTTCTTT CAAAGGAAAC AGGAACGCCC ATTTACGCTT TCGCACTGAT GCCAAATCAT
GTCCATCTGC TGCTTAAAAG CGGCGCTAAA GGGTTGCCTA CGTTTATGCG CCGGCTACTC
TCGTCTTATG CCATGTTTTT TAACTCCCGG CATAAGCGCG TCGGGCATGT CTTTCAAAAC
CGATATAAAT CGATAATCTG TGAGGAGGAT CGATATTTTC ATAAACTGGT CGCCTATATC
AACCTTAACC CTTTGAGAGG CGGGCTGACG GACTCATTGG ATACGCTTAT TCATTACCCC
TGGTGCAGTC ATGGAAGGAT TGCCTTCGGA ACAAAAAGCG ACTGGCTGGA GCGGAACTAT
GTCTTATCGA GTTTTGGTGA TACAGAACAA GCTGCACGGC GCGCTTACTT CCAGTTCATG
TCTGAAGAAT TTCCTTATGA CCGGACGAAT GAACTTAACG GAGGAGGTTT AGTTCGGTCG
AAGGGGGGAT GGTCAGCAGT GAAATCATTA CGCTCTCAAG GGAAAAAAAT TGAGTCTGAT
GAGCGGATTC TTGGCTGTGA CCTGTTTGTC AGAAAGATCT GCCAGCAAGC TGAAGCGCAA
GTTGCACGAC AGCTCCCGCA TAATGAAAAG CTTGAGGAAG CGCTGAAGAC AATTGAAGAA
TACTGTAGCG AAGCCAATAT CAGCCTTTCT CATCTCCGCT CCGGAAGCAG AAACGACAAC
CTCCCCATGT TGCGGCAGGA ACTGGCCAAA CACCTTGTCA ACAAGATCGG GCTGACCCTG
GCTGAAACAG CTCGCCAGCT TGGAGTCACA ACATCAGGGG TCAGCAAGAT GCTTGAACGA
TGCAGGCGTG ATCATTAA
|
|---|
| Protein sequence | MPRGARLDSP GTLHHVMMRG IEKSLIFYDD HDRRMMLKKI GFLSKETGTP IYAFALMPNH
VHLLLKSGAK GLPTFMRRLL SSYAMFFNSR HKRVGHVFQN RYKSIICEED RYFHKLVAYI
NLNPLRGGLT DSLDTLIHYP WCSHGRIAFG TKSDWLERNY VLSSFGDTEQ AARRAYFQFM
SEEFPYDRTN ELNGGGLVRS KGGWSAVKSL RSQGKKIESD ERILGCDLFV RKICQQAEAQ
VARQLPHNEK LEEALKTIEE YCSEANISLS HLRSGSRNDN LPMLRQELAK HLVNKIGLTL
AETARQLGVT TSGVSKMLER CRRDH
|
|---|
| |