| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1780 |
|---|
| Symbol | |
|---|
| ID | 6458870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1943231 |
|---|
| End bp | 1943776 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642725764 |
|---|
| Product | Plastoquinol--plastocyanin reductase |
|---|
| Protein accession | YP_002016440 |
|---|
| Protein GI | 194334580 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00627342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAA CAGGTAACTT CAAAAGCCCC AAGAGGCTGG ATTCACTTGA GGGTGGTGCT
GGTTCTTCCT CCGGCGCTGT TGCTGCCGGG AAAGCCCGCG AAGACTCCAT GTCCGGTCTT
GATTTTGAAC GCCGCAGTTT CCTTGGCAAA GTTGTCGGCG GTATCGGTGC GGTTGTTGCA
GCAAGCACGC TGTACCCTGT CGTCAAGTAC ATCATTCCGC CCGCCGCAAA GGAAATGAAA
GAAGTTGACG AACTGGTTGT CGGTAAAGCA TCGGAAGTAC CGGCCGATAC CGGCAAGATC
TTCCAGTTCA ACAAGGATAA AGTCATTGTC ATCAACAATG GCGGCAAACT GACCGCCTGC
AGTGCCGTTT GTACTCATCT CGGTTGTCTC GTGCAGTGGA AAGAGGATGA GAACCTTATT
TATTGTGCCT GCCACGGTGC ACGTTACCAG CAGACAGGGG AGATTATTTC CGGTCCTCAG
CCGCTTCCGT TGACACCCTT CAGTGTCAAA GTCGACGGTG ACGATCTCGT CGTTTCAAAA
GCTTAA
|
|---|
| Protein sequence | MAQTGNFKSP KRLDSLEGGA GSSSGAVAAG KAREDSMSGL DFERRSFLGK VVGGIGAVVA
ASTLYPVVKY IIPPAAKEMK EVDELVVGKA SEVPADTGKI FQFNKDKVIV INNGGKLTAC
SAVCTHLGCL VQWKEDENLI YCACHGARYQ QTGEIISGPQ PLPLTPFSVK VDGDDLVVSK
A
|
|---|
| |