| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1725 |
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| Symbol | |
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| ID | 6460069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1883928 |
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| End bp | 1884473 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725714 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_002016390 |
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| Protein GI | 194334530 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000975203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.54693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTTA TTGAAACGGC TATTCCGGAT GTTCTGGTTT TTGAGCCTCG GATTTTTGGT
GATGAGCGGG GGTATTTTTT TGAGTCTTTT CGACAGGATT TTTTTGAGAA GCATGCTGGA
GACGTTCATT TTGTGCAGGA TAATGAGTCG CGCTCTCACT ATGGGGTGTT GAGAGGATTA
CATTTTCAGA AGGCGCAGTA TAGCCAGGGG AAACTGGTTC GGGTTGTCGA GGGGGCTGTG
CTTGATGTTG CTGTTGATAT TCGAAAAGGG TCACCATGGT TTGGCAAGCA TGTTGCGATG
CATCTGAATG CAGAGAAAAA GAACATGATG TGGATCCCGA GGGGGTTTGC TCACGGGTTT
GTTGTGCTGT CGGAAACGGC GGTATTTACC TATAAGTGCG ATAATTATTA TGCGCCTGAA
GCTGATGCCG GGATCCGGTG GAATGATCCG GCGCTGGGCA TTGAGTGGGG TGTGGATGCT
TCGGTGATCG AGGTGTCGGA GAAGGATGCG AATTTGGCGT TACTTGCTGA GATTGGGGAA
TGGTAG
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| Protein sequence | MNVIETAIPD VLVFEPRIFG DERGYFFESF RQDFFEKHAG DVHFVQDNES RSHYGVLRGL
HFQKAQYSQG KLVRVVEGAV LDVAVDIRKG SPWFGKHVAM HLNAEKKNMM WIPRGFAHGF
VVLSETAVFT YKCDNYYAPE ADAGIRWNDP ALGIEWGVDA SVIEVSEKDA NLALLAEIGE
W
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