| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1720 |
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| Symbol | |
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| ID | 6458421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1877985 |
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| End bp | 1878974 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725709 |
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| Product | P-type conjugative transfer ATPase TrbB |
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| Protein accession | YP_002016385 |
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| Protein GI | 194334525 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00147948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATA TTTCAATAAG CCGTCGAATG GCTTCATTGC GTAGTGCTGT ATTGCCTATT
GTTCATTTGT TGGAGCAGGA GCGTATTGTT GAGATTATGC TGAACCCTGA TGGCTGTATC
TGGGTTGAGG AGGCTGGAAA GGGTATGTAC CGGACGGATA TCAGAATGAG TTCGGACGAT
GCTGAACGGA TGATACGCCT TGCTGCTGCT GCTGTTCATA CCGAGGTTAA CGAGCGTCAC
CCATCCCTGG CTGCGACGCT GCCGGGCTGG GGAGCGCGCC TTCAGGCTTC GGTTCCTCCT
ATTGTTTCTT CCCCTGTGTT TGCTTTGCGA AAACCTCCTG TTGTCGTGTT TAGGCTTGAT
GATTATGTCG ATGCGGGGAT TATGACTGCT GAACAAGCGG CTTACCTGGA GGGTTGTGTG
TATGCCAGAC GCAATGTTCT TGTCGGTGGC GGAACGGGTT CGGGGAAGAC GACCCTGACC
AACGCTCTTC TTGCTGTTGT TGCCGCTACC GGTGATCGGG TGTATATCGT TGAGGATAAT
CCTGAGCTGC AGTGCAGGGC TGAGAATATG GTGAATGTGC TGGTTCATCC TCCTTTTTAT
ACGCATCAGC ATGCGGTTAT GGATGCGATG CGTTTCAGGC CTGACAGGAT CATTGTGGGA
GAGGTCCGCG ATGGTGCTGC GCTCGATATG CTGAAGGCCT GGAATACCGG GCATCCGGGT
GGAATTGCTA CGATTCATGC GAATCATACG TCAGCCATGC TTGACCGGAT GGCTCAGCTC
TGTCAGGAAG TTATGCCGTC GGCTCCACGG TATCTGATTG CAGAAGCTGT GGATGTGTGT
GTGCATATCA GTCGGAACGA TCGTTCTTCT GCAGGTCGGA TTGTGACGGG TATTGCTGAG
GTGAAGGGCC TCGGCGATGG TGGCGAGTGG CTTCTGGAGC AGCGGTTTGG TCAAGGTATA
CCGGAACTTT GCTGTATAGG CGGGCCTTGA
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| Protein sequence | MNDISISRRM ASLRSAVLPI VHLLEQERIV EIMLNPDGCI WVEEAGKGMY RTDIRMSSDD
AERMIRLAAA AVHTEVNERH PSLAATLPGW GARLQASVPP IVSSPVFALR KPPVVVFRLD
DYVDAGIMTA EQAAYLEGCV YARRNVLVGG GTGSGKTTLT NALLAVVAAT GDRVYIVEDN
PELQCRAENM VNVLVHPPFY THQHAVMDAM RFRPDRIIVG EVRDGAALDM LKAWNTGHPG
GIATIHANHT SAMLDRMAQL CQEVMPSAPR YLIAEAVDVC VHISRNDRSS AGRIVTGIAE
VKGLGDGGEW LLEQRFGQGI PELCCIGGP
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