| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1673 |
|---|
| Symbol | |
|---|
| ID | 6459395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1821114 |
|---|
| End bp | 1822826 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642725661 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_002016338 |
|---|
| Protein GI | 194334478 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000218302 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.669002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TCCGCTGGAC GATCCGGGAT AGCGATGATG AGGCCTGTGA GCGGCTTTCC
CGGGAGATTA ATGTGAGTCT GCCGATTGCC CGTGCACTCT GCAATCGAGG AATCTGTGAT
TTCGACCAGG CAAAAGCTTT TTTCCGGCCT GATCCTGCCG TGATTCCTTC ACCGTTTCTT
TTCAGGGATA TGCAGTGCGC TGTTGAGCGC GTGATGAAGG CGCTGGAACA GGGTGAGCAT
ATTCTGCTCT ATGGTGATTA TGATGTGGAC GGTACGACGG GGACGGCTCT TCTGATGCTT
TTTCTTCGTT CACAGGGTGC AGAGGTTTCC TATTATATCA ATGACCGGTT CACTGAGGGC
TACGGATTAT CGGATGCAGG GGTTGGGTGC GCGGTTGAAC GAGGTGCCGG ACTGGTTATC
ACGGTGGATT GCGGTATCAG GGCGGTGAAG GAGGTCGAGG CGTTCAATGT TCAAGGGATC
GATGTTATTG TCTGCGATCA TCATGAACCC GGAACGCTTC CTGCCGCCTC TGCGATTCTG
AACCCGAAAG TACCTGGATG CAGTTATCCT TTCAGGGAGT TATGCGGTTG CGGTGTTGCG
TTTAAGCTGG TTCAGGCATT GATTGAACAG ATGGGAAGGG ATGCTGCTGA GTGGGAGCAG
TATCTCGATC TTGTTGCTGT AGCTACTCTT GCCGATATGG TCGCGCTGAA GGAGGAGAAC
CGTATTTATA TGCATCAGGG ACTCCAGCGC CTCAAAGCTG CACCGCGTAT GAGTATACAG
GAACTTATCT CCTGTATGGG CGCCAGGCTG GAATCGCTGT CAGCCGGTGT GATAGCCTTC
GGTATTGCTC CAAGAATCAA TGCTGCCGGC AGGATGCAGA ATGCGGCGAC TGCCGTTGAA
TGGCTGATGT CCGACTCCCG TGATGAGTGC AGGAAGCATG CAGAGGAACT TGACCGGCTG
AATGGGGAGC GGCGTGAGAT CGATGCCGGT ATTCTGAAAC TCGCAGAGGG TATGGTGAAT
GGTTACTTTG CCAGTTACTG TTCATCGCTT GTCCTCTATC ACGAGGATTG GCATCTTGGC
GTGCTTGGTA TTGTCGCATC GCGTCTTCAG GAGAAATATT ACCTGCCGAC GGTTGTGTTG
GGGGGCAGCG ATGGTCTTAT CAAGGGGTCT GTCAGAAGTG TTGGCGGTTT GAATGTGATG
GAAGTTCTTC AGGAGTGCAG CGGATTGCTT GAGAAATTTG GCGGTCATGA GGCTGCTGCG
GGGGTGACGC TCAAACCTGA GAACCTGCAG CTTTTCAGAA AACGCTTCGA TGCTCTCTCG
GCAGAACGAT TGAGTTATGA ACAGCGCCAG AAGGAGGTGA TCATCGATAC GCAATTACAG
CTTGACGAGG TGAGCCCTAA ATTTATCAAT GTTCTTTCAC AGTTCGCTCC TTTTGGATTT
GGTAATCCCG AACCTGTGTT TCTCAGCCGC GGGCTCAGAA TTTCGGGCTA CCCCCGTCTG
CTGAAAGGCC GCCATGTGAA GTTTTCGGTT AAAACCGGAA GCGGCAGGAT TTTCGATGTT
ATCGGTTTCA GTCGTGAGGA TATTTATCGT GCTCTTGAAC GTGGATCGAA GCAGGTTTTT
TCGATGGTCT ACACTCTTGA GGAGAACGAA TGGAACGGCA GGAAGACGAT ACAGATGAAG
CTGAAGGATA TGGCCGTCGA GAAGTCACAA TGA
|
|---|
| Protein sequence | MKRFRWTIRD SDDEACERLS REINVSLPIA RALCNRGICD FDQAKAFFRP DPAVIPSPFL
FRDMQCAVER VMKALEQGEH ILLYGDYDVD GTTGTALLML FLRSQGAEVS YYINDRFTEG
YGLSDAGVGC AVERGAGLVI TVDCGIRAVK EVEAFNVQGI DVIVCDHHEP GTLPAASAIL
NPKVPGCSYP FRELCGCGVA FKLVQALIEQ MGRDAAEWEQ YLDLVAVATL ADMVALKEEN
RIYMHQGLQR LKAAPRMSIQ ELISCMGARL ESLSAGVIAF GIAPRINAAG RMQNAATAVE
WLMSDSRDEC RKHAEELDRL NGERREIDAG ILKLAEGMVN GYFASYCSSL VLYHEDWHLG
VLGIVASRLQ EKYYLPTVVL GGSDGLIKGS VRSVGGLNVM EVLQECSGLL EKFGGHEAAA
GVTLKPENLQ LFRKRFDALS AERLSYEQRQ KEVIIDTQLQ LDEVSPKFIN VLSQFAPFGF
GNPEPVFLSR GLRISGYPRL LKGRHVKFSV KTGSGRIFDV IGFSREDIYR ALERGSKQVF
SMVYTLEENE WNGRKTIQMK LKDMAVEKSQ
|
|---|
| |