| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1665 |
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| Symbol | |
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| ID | 6459519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1811891 |
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| End bp | 1813627 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725653 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_002016330 |
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| Protein GI | 194334470 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0230718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.637803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG ACCGTCGTCT GCTGAAGCTC GTCACCGCAC AGCCCCGGCC ATTTATCGGA
TCGATCATCT CTGGTTCACT GGGGGGAGCA GCGCTTGTCG CCCAGGCATG GCTGCTCTGC
ACGGTCGTCA CGATTCTCTT TCTCGAACAA TCTGATATTG CTGCAATCCC CCTCTACCTG
CTTCTCTTTG GTGCAGTAAG TCTGCTACGG GCTCTCGTGA GCTGGACGGC TCAAATTGAA
GCAAACCGCG GCACGCTCAG CATCAAAAAA AACCTTCATT CGCGCCTGAC AGCAGTCATG
GCATCACTCG GGCCAAACTA TACCGCATCG AAACAGAGCG GTCAGCTCAG CACCACTATT
CTCAGAGGCA TCGAAGCGCT TGATCCATAC TTCAGCCAGT ATATCCCCCA GCTTTTTCTC
TCACTCATCA TCCCGCTCAC CATCCTTGCC GCCGTTATCC CTTCGGATCC TCTGAGCGGA
CTTATCCTTC TCGGGACCGC ACCGCTCATT CCCCTGTTTA TGATCCTCAT CGGAAAAGCC
GCACAGAACA TGACCGAAAA ACAATGGAAA ACCCTGAGCA GGATGAGCGG CTACTTTCTT
GATGTCCTGC AAGGCCTGAC AACGCTCAAG CTCTTTGGCA GAAGCCGTGA CAGAATCGCC
TCAATAGAAC AGATGAGTGA AGCCTTCAGA GCATCAACCA TGAAAGTGCT CAAAATTGCC
TTTCTCTCAT CGCTCACTCT TGAACTTGTC GGTACGATAG GAACGGCTAT CATTGCCGTT
CAAATAGGAT TGAGACTTCT TGCCGGAGCG CTTGACTTCC ATACAGCCTT TTTTGTCCTG
CTGCTGACAC CTGATTTCTA CCTCCCCCTG CGCCAGCTCG GGACCAAATT TCATGCCGGT
ATGGAGGGTG TCAGTGCTGC AAATGAGATC TTCCCCGTTC TTGAACATGA ATCCGAATCA
ACCCATCCGG ACAAACAAAC ATCCTCACCA GTTGATCCAT TCAGACCGAT CAGCTTCAAC
GATGTCTGCG TTCGCTATCC GGGCCGTACC GAAAACGCGC TCGGCCCGGT CAGCTTCACC
ATTGAGCCGG GCACAAAAAC AGCCATTATC GGTCAAAGCG GTGCAGGAAA AACCACCTGT
ACACAGCTCC TCCTTCGATT CATCACCCCG TCATCAGGCA ATATTTCCAT CGGTGAAGAC
AACCTGCAGT CGATCCCTGC ATCTCAATGG CAGCGTCATA TAGCATGGGT ATCCCAACAG
CCATGGCTTT TCAATACCTC TCTACGCGAA AACCTGCTGA TGGCAAGACC TGATGCAACC
AGGGAGGAAC TCAATGCGGC AATAGCATCC AGCGGATTGA CAGCGCTCAT CGATGCGCTT
CCGGAGGGAC TGGAAACAAT TATCGGCGAA CAGGGATCGC GGATGAGCGG CGGAGAAGCG
CAACGTCTGG CCATAGCCAG GGCATTCATA CGAAATGCTC CGATCCTCGT TCTCGACGAG
CCCACATCGC ACACCGATCC TCATCTTGAA GAGAGTCTGC AGAAATCGCT CAAAACCCTC
ATGAAAGGAC GAACGACGAT TGTCATCGCA CACCGCCTCA ACACTATCAT GGATGCCGAC
AGGATTATCG TTCTCCACAA CGGCACCATT CTGCAGGAAG GAACGCATGA AGAGCTCATC
GGCAAAGAGG GCTACTACCG AACAGCCACC ATGACAGCCA GGGAGACAGG GATATGA
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| Protein sequence | MNLDRRLLKL VTAQPRPFIG SIISGSLGGA ALVAQAWLLC TVVTILFLEQ SDIAAIPLYL
LLFGAVSLLR ALVSWTAQIE ANRGTLSIKK NLHSRLTAVM ASLGPNYTAS KQSGQLSTTI
LRGIEALDPY FSQYIPQLFL SLIIPLTILA AVIPSDPLSG LILLGTAPLI PLFMILIGKA
AQNMTEKQWK TLSRMSGYFL DVLQGLTTLK LFGRSRDRIA SIEQMSEAFR ASTMKVLKIA
FLSSLTLELV GTIGTAIIAV QIGLRLLAGA LDFHTAFFVL LLTPDFYLPL RQLGTKFHAG
MEGVSAANEI FPVLEHESES THPDKQTSSP VDPFRPISFN DVCVRYPGRT ENALGPVSFT
IEPGTKTAII GQSGAGKTTC TQLLLRFITP SSGNISIGED NLQSIPASQW QRHIAWVSQQ
PWLFNTSLRE NLLMARPDAT REELNAAIAS SGLTALIDAL PEGLETIIGE QGSRMSGGEA
QRLAIARAFI RNAPILVLDE PTSHTDPHLE ESLQKSLKTL MKGRTTIVIA HRLNTIMDAD
RIIVLHNGTI LQEGTHEELI GKEGYYRTAT MTARETGI
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