Gene Paes_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1660 
Symbol 
ID6459443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1805950 
End bp1807164 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content51% 
IMG OID642725648 
Productaminotransferase class I and II 
Protein accessionYP_002016325 
Protein GI194334465 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.582625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTATA CTCATTCACC TGTATTCACT CCAGCACAAC GAGTTCAGAA TTATAACTAT 
GCCATACGCA ATATCGTCAC CCATGCCAGA AAACTGGAAG CACAGGGAAA AAAAATAACC
TATCTCAATA TTGGCGATCC TGTGCTCTAC GGCTTTCAGC CGCCAGAGGA ACTCATCGAA
GCAAATGTCC TGGCCCTGCG CCATGGTCAT AATGGTTACT CTCCTTCTTC CGGAAGAAAA
GAAGCCGTCG AAGCTATTGC TGAAGACGCC TGCCGACGGG GAATCAGCAC ATCGCCGGAC
AATGTCATCA TCACTTTTGG AGCATCCGAA GCGGCAGATC TGGTCTGTAC ATCGATGCTC
AATCCGGGCG ACGAGGTACT CTGTCCTTCT CCCGGATATC CGCTCTACAA TGCCATCATC
GCCAAACTCA ACGCAAGAGA AGTTCGTTAC AGCCTCGATC CGGCCAATGA CTGGCTGCCG
GATCCTGAAC AAGTCGAAAA AAGCATCACG CCACGAACAA AAATTCTTGT CGTCATCAAT
CCCAACAATC CCACCGGGGA GCTCTACTCG AGGGAAACAC TCGACATGTT CGTCGACATC
GCCCGCAGGC ACAAGCTGCT CATCATTACC GATGAGGTCT ATCACAAACT CGTGTACGAA
GGAGAGCATA TCCCCCTGGC ATCTCTTGCC AGTGACGATG TCGCCGTTAT AACCATTGAC
AGCCTTTCCA AAAACTATAT GGCTCCCGGC TGGCGGACAG GCTGGCTCAT GATCACCAAC
AGCGCTCTTA TCCCTGATGT CCGCCAGGCA TTCATCAAAC TTGCCGATGC CAGGTTATGC
GCACCGATGG CACCCCAATA CACCATCAAA GCAGCGATGA CAATGGGACC GGAATATAAT
GAAACGATAC TCTCCCGTCT TCGTGCCCAG AGAGAGCTGA CCATCGACAG ACTCAATGCG
ATCGAAGGAT TCAGCTGCAA TAAGCCATCA GGCGCATTCT ATGTCATGGG AAAACTCGAT
CTTGACGCCA CCCCGTTCAA AACCGATGAG GAATTCGTAC TGAAGCTGCT TCAGGAAAAA
CAGGTCCTCT TTGTCCACGG CTCAGGTTTC GGTACCGACC CGGCAAGCGG ATATGCCAGA
ATTGTCTACC TTCCCGATGT CACTATCCTT GAAAAGGTCT ATGCTGATGT CGCAGATTTC
ATCAACAGCT TATAA
 
Protein sequence
MPYTHSPVFT PAQRVQNYNY AIRNIVTHAR KLEAQGKKIT YLNIGDPVLY GFQPPEELIE 
ANVLALRHGH NGYSPSSGRK EAVEAIAEDA CRRGISTSPD NVIITFGASE AADLVCTSML
NPGDEVLCPS PGYPLYNAII AKLNAREVRY SLDPANDWLP DPEQVEKSIT PRTKILVVIN
PNNPTGELYS RETLDMFVDI ARRHKLLIIT DEVYHKLVYE GEHIPLASLA SDDVAVITID
SLSKNYMAPG WRTGWLMITN SALIPDVRQA FIKLADARLC APMAPQYTIK AAMTMGPEYN
ETILSRLRAQ RELTIDRLNA IEGFSCNKPS GAFYVMGKLD LDATPFKTDE EFVLKLLQEK
QVLFVHGSGF GTDPASGYAR IVYLPDVTIL EKVYADVADF INSL