| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1654 |
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| Symbol | |
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| ID | 6458438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1801415 |
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| End bp | 1802287 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642725642 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_002016319 |
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| Protein GI | 194334459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.910773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAGTA TTACATCAAT ACTCGGACTG ATCGGGAGAA ATGTCAACTA CTCATACTCC
CCTTTTATCC ACAACACCGC AGCAGAAATG CTGCGGCTCC CGTTTTATTA TACAATTTTC
AACATAGCCG ATGCCCGGCA GATTCCTGAC GCACTTAACG GAATGAGAGC CCTTGGTATA
GCGGGTTTGA ACGTCACCAT TCCCTACAAA CAGGTGGTCA CTGAATATGT AGATACCCTT
TCCGCAGAAG CTCAAGCTGT CGGGGCTGTC AATACCATCG TCAACAACAA CGGCAGACTG
AGCGGCTGCA ATACCGATAT TGCCGGAGTA TCACATCCGC TCAAACCCTA TAAAGAGCGT
CTCCATCAAT CGCCTGCAGG CATTTTCGGC AACGGAGGGG CTGCCCTGGC AGCGGTTGAA
GCGCTGCGCC GCGACTACCA TCCCTCAGCC ATTCGCCTCT TTGTCAGGGA TCCTGACAAA
GGGCTGGCTC TCGCAGAGCA GGTTCATGCG AAGCACCCGG AAGCTCCCAT TGAAATATTC
AAGATCGATG CTTATGATGC TATCCGCGAC TGCCACCTTC TGATCAATGC AACCCCGATC
GGGACCAAAG GTGTTCAAAC TGCAGGAAAC AGCGCTCTTC TGCCCCAGGA ACAAAAGCTC
CTGCACGACG GGCAGATTAT TTTCGACATG GTCTATAATC CTCTTCGAAC CCCGTTTGTC
AACATGGCCG CAGAAGCAGG CGCAGTCGTC ATCCCGGGGG TCGAGATGCT TATAGCTCAG
GCTGCAGAAT CTTTTTGCCT GTGGACCGGC GAAACAATGC CTGTCGATAG TATCCGCGAA
AAAATTCTCA AAAAACTGAC AGCACAGCCC TGA
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| Protein sequence | MCSITSILGL IGRNVNYSYS PFIHNTAAEM LRLPFYYTIF NIADARQIPD ALNGMRALGI
AGLNVTIPYK QVVTEYVDTL SAEAQAVGAV NTIVNNNGRL SGCNTDIAGV SHPLKPYKER
LHQSPAGIFG NGGAALAAVE ALRRDYHPSA IRLFVRDPDK GLALAEQVHA KHPEAPIEIF
KIDAYDAIRD CHLLINATPI GTKGVQTAGN SALLPQEQKL LHDGQIIFDM VYNPLRTPFV
NMAAEAGAVV IPGVEMLIAQ AAESFCLWTG ETMPVDSIRE KILKKLTAQP
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