Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1647 |
Symbol | |
ID | 6458650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1792561 |
End bp | 1793418 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725635 |
Product | hypothetical protein |
Protein accession | YP_002016312 |
Protein GI | 194334452 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000320063 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTAAAA AAATAACCTC ACTGCTCGCA GTCATACTCC TCACCCTCTC ATCAATCCCT GCGGCTCAAT CGGCACCCAC ACTCGACACC CTGTTCGAAC CGCTCGTCGC TGACCCAATG GAACCAAGAA TCGCCGTCAT GCCCTGGCTG GACGATGACT ACCTGCAGCT TGATATCGGC TCATCTGCAG ATCTCTACCA GAACGATGAC GGAACCATGG CATTCGGTAT CGACTTCGGC ACCTGGTCTC TCCTGCAACG CTCCAGCAAC TTCAAGTTTC CTGTCGATGC CATTGACTAC ATGTTCGGGG TCAACTTCTC AATGAAACAG CAACTTGAAG AGAGCCCCCT GCCGTTCGAC GAATTCTCGG CAAGAATCCG CCTGAGTCAT ATTTCAGCCC ATTTCGAAGA CGGTCACTAT GATGAAGAGG CTGGTGAGTG GATGCATGAG GAAGCGTGCC CTTTCGGCAT CCCGTTCACC TACAGCCGCG AATTCATCAA CATTCTTCTG GCTCTTTCTG CAGAAGACTA CCGGGTCTAT CTCGGGTACC AGTATCTATG GCACACCATA CCCGATGAAA TCAACCGCCA CAGCCTGCAG GCCGGCGTCG AACTCTCGAC CCCGGGCAAC ACCTACCTTG CGGCAGACTT CAAACTGCTT CCGGTCTGGG ATAACGATCT TGAAAAAACG GACAGCTTCA AAGGAACCTG GAACCTGCAG GCAGGATGGA GGCTTACCGC CATCGGTGCT GAAAATGTCA GAATAGCATA CAACTACTTC AACGGCATGA GCCGTCACGG CATGTATTTC TACAACGATG AAAGCTACAG TACCCTTGGC GTCATCGTAG ACCTATAA
|
Protein sequence | MLKKITSLLA VILLTLSSIP AAQSAPTLDT LFEPLVADPM EPRIAVMPWL DDDYLQLDIG SSADLYQNDD GTMAFGIDFG TWSLLQRSSN FKFPVDAIDY MFGVNFSMKQ QLEESPLPFD EFSARIRLSH ISAHFEDGHY DEEAGEWMHE EACPFGIPFT YSREFINILL ALSAEDYRVY LGYQYLWHTI PDEINRHSLQ AGVELSTPGN TYLAADFKLL PVWDNDLEKT DSFKGTWNLQ AGWRLTAIGA ENVRIAYNYF NGMSRHGMYF YNDESYSTLG VIVDL
|
| |