Gene Paes_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1602 
SymbolrpmA 
ID6459580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1746350 
End bp1746604 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content49% 
IMG OID642725590 
Product50S ribosomal protein L27 
Protein accessionYP_002016267 
Protein GI194334407 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0211] Ribosomal protein L27 
TIGRFAM ID[TIGR00062] ribosomal protein L27 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATA AAAAAGGTGG CGGTTCTACC AAGAACGGCC GTGACAGTAA TCCGAAGTAT 
CTTGGCGTTA AAGCAGCAGG CGGCTCTACG GTTTCTGCCG GATCGATCAT CGTACGCCAG
AGGGGCACGG TTTTCAAACC GGGCAACAAT GCCGGTATCG GTAAAGATCA TACCATTTTT
GCTCTGATTG ACGGTAAAGT CAGCTTCAGA AACGGGCGCA ACAACAAAAA ACAGATAGAC
ATACTTCCTG TCTGA
 
Protein sequence
MAHKKGGGST KNGRDSNPKY LGVKAAGGST VSAGSIIVRQ RGTVFKPGNN AGIGKDHTIF 
ALIDGKVSFR NGRNNKKQID ILPV