Gene Paes_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1552 
Symbol 
ID6458888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1691786 
End bp1692379 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID642725541 
Producthypothetical protein 
Protein accessionYP_002016218 
Protein GI194334358 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.99206e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000157671 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACTG TTTGGCCTAT CGCGTACATG AGCGGTAAGC TTGGTCTTAC CTGGATGGAC 
GATGTTGAGT TTACCTCTAA CTGGATTGAC AGCACAGAGG GTTTCGATCT CGGCACTGAT
GCTGGAGTTA CTCTTTCTTG CGCAGTTGGT TATGATTTCG GAGACTATCG CGCTGAACTT
GAGCTTGGAT ATCAGTCAAA CGATGTTGAT ACCTGGGCTG ATTCAGATGA TGGTTACGTC
AGTGATGCAG AGGAGGCTGG CGGAGAAGTG TTTGTCATTT CAGTGATGGC CAAAGGTGCT
TACGATATTG ATCTCGGCGG CGTCGAACTT TCTCCTTTTG TTGGTGCAGG GTTTGCATTC
ATCAGCTTTG ATGATGCCCC GGTTTGCTTC AGCGGAAGCG AGTACAGAAG CAAATCAGCA
ACCACCTTTG CCTATCAGAT CGGAGCATCT CTTGCTCTTC CTGTAGCAGA TACTATACTG
CTTGAAGGTC GTTACCGTTA CCTCGGTACC GCAAACTTCA ACTTTGACAG GCCTGAGGCT
GAGGCGGATT TTGCAAGCCA CAGCGCCCTG GTCGGATTGC GTTTTTCGCT CTGA
 
Protein sequence
MLTVWPIAYM SGKLGLTWMD DVEFTSNWID STEGFDLGTD AGVTLSCAVG YDFGDYRAEL 
ELGYQSNDVD TWADSDDGYV SDAEEAGGEV FVISVMAKGA YDIDLGGVEL SPFVGAGFAF
ISFDDAPVCF SGSEYRSKSA TTFAYQIGAS LALPVADTIL LEGRYRYLGT ANFNFDRPEA
EADFASHSAL VGLRFSL