Gene Paes_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1488 
Symbol 
ID6458612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1626965 
End bp1627963 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content52% 
IMG OID642725477 
Producthypothetical protein 
Protein accessionYP_002016155 
Protein GI194334295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00364403 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT CCGCAAAAAG AAGCAACCCC GATATGATCC GTTCAAAAGA GGCATGGAAG 
CAGCTGCTTG AAGAAAAGTT GCCTGCTCGC GAGCGTATTG TGGACCGTAA CCGTGCCATT
ACAGCACACT ATGCTCAACT CTACCTGCAA TGTCCCGAAC TTTTCAAGTG GTCCGGCATG
GCAGCGTTCG CATCAAGCCA GGTTGGTGTG GCACTGGCTT TTGTCGAACT GCTCGAAACT
CCCTCAGCGA TGATGAAAAT ACGCAGGGAG GATGTGCCGC GACAGGATAT GATCTCCCTG
TTGGGCGGTA TGGCGGGTTT TATTTTTCGC TCACTGTTTT CTCTTCCTGT CAGCGTGTTT
GATTCGGCTT TGCGGACGCT GTTGCTTGAC GATCTCAACG AGATCCGCAC TGGAAACAAT
AGCATCTATC AGGATATAGC CTGGGCTCAT GCAGCATATA TCGAAGGGGG GCTCTCTGAG
ATTGCCGCAA ATGCAGACGA ACAGGAAAAG GAGCTGATGC TTCAAGGGTT CTCTCTCATC
GATAGAGGGG CAGCTCTGCT CAAGGCGGGA GACGATGCAG TTTTGGCTCG CAGTATGATC
CGTGATGGCA ATATCTGTCT GTTGCGTCAT GAGCAGCTCA AGACGCTCTA TCCTGTTTTC
AACGCCATCA GCATACCAGG GAGAGTTGTC GTGTCATTCG GCAGTGAACT TGATTTTCAG
GGGGCCGCGC CGCCTGGCGT GGCTGACAGG GCATCGTTTG CAGAATATTC GGGTTATCTG
GAGACGCTCA CAGGCGCACG ACGTGTGACC GACCAGGATG ATCGCTGGAA CTGGATTGAA
AACAATGTAC TTCCTGTATG GAATGCCATT GACAGCACCT ATGCCACCAG CCCTCATCTT
GAGCGAAAAC TCAGAGAGAT GGCCGGCGGT AATCCTTCCA TGCTTCAGCA GATCGCACGG
TTTGCATCGA CCATGTCGTT TCTTCCGGGA CTGGAATAA
 
Protein sequence
MKSSAKRSNP DMIRSKEAWK QLLEEKLPAR ERIVDRNRAI TAHYAQLYLQ CPELFKWSGM 
AAFASSQVGV ALAFVELLET PSAMMKIRRE DVPRQDMISL LGGMAGFIFR SLFSLPVSVF
DSALRTLLLD DLNEIRTGNN SIYQDIAWAH AAYIEGGLSE IAANADEQEK ELMLQGFSLI
DRGAALLKAG DDAVLARSMI RDGNICLLRH EQLKTLYPVF NAISIPGRVV VSFGSELDFQ
GAAPPGVADR ASFAEYSGYL ETLTGARRVT DQDDRWNWIE NNVLPVWNAI DSTYATSPHL
ERKLREMAGG NPSMLQQIAR FASTMSFLPG LE