Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1488 |
Symbol | |
ID | 6458612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1626965 |
End bp | 1627963 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725477 |
Product | hypothetical protein |
Protein accession | YP_002016155 |
Protein GI | 194334295 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00364403 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCTT CCGCAAAAAG AAGCAACCCC GATATGATCC GTTCAAAAGA GGCATGGAAG CAGCTGCTTG AAGAAAAGTT GCCTGCTCGC GAGCGTATTG TGGACCGTAA CCGTGCCATT ACAGCACACT ATGCTCAACT CTACCTGCAA TGTCCCGAAC TTTTCAAGTG GTCCGGCATG GCAGCGTTCG CATCAAGCCA GGTTGGTGTG GCACTGGCTT TTGTCGAACT GCTCGAAACT CCCTCAGCGA TGATGAAAAT ACGCAGGGAG GATGTGCCGC GACAGGATAT GATCTCCCTG TTGGGCGGTA TGGCGGGTTT TATTTTTCGC TCACTGTTTT CTCTTCCTGT CAGCGTGTTT GATTCGGCTT TGCGGACGCT GTTGCTTGAC GATCTCAACG AGATCCGCAC TGGAAACAAT AGCATCTATC AGGATATAGC CTGGGCTCAT GCAGCATATA TCGAAGGGGG GCTCTCTGAG ATTGCCGCAA ATGCAGACGA ACAGGAAAAG GAGCTGATGC TTCAAGGGTT CTCTCTCATC GATAGAGGGG CAGCTCTGCT CAAGGCGGGA GACGATGCAG TTTTGGCTCG CAGTATGATC CGTGATGGCA ATATCTGTCT GTTGCGTCAT GAGCAGCTCA AGACGCTCTA TCCTGTTTTC AACGCCATCA GCATACCAGG GAGAGTTGTC GTGTCATTCG GCAGTGAACT TGATTTTCAG GGGGCCGCGC CGCCTGGCGT GGCTGACAGG GCATCGTTTG CAGAATATTC GGGTTATCTG GAGACGCTCA CAGGCGCACG ACGTGTGACC GACCAGGATG ATCGCTGGAA CTGGATTGAA AACAATGTAC TTCCTGTATG GAATGCCATT GACAGCACCT ATGCCACCAG CCCTCATCTT GAGCGAAAAC TCAGAGAGAT GGCCGGCGGT AATCCTTCCA TGCTTCAGCA GATCGCACGG TTTGCATCGA CCATGTCGTT TCTTCCGGGA CTGGAATAA
|
Protein sequence | MKSSAKRSNP DMIRSKEAWK QLLEEKLPAR ERIVDRNRAI TAHYAQLYLQ CPELFKWSGM AAFASSQVGV ALAFVELLET PSAMMKIRRE DVPRQDMISL LGGMAGFIFR SLFSLPVSVF DSALRTLLLD DLNEIRTGNN SIYQDIAWAH AAYIEGGLSE IAANADEQEK ELMLQGFSLI DRGAALLKAG DDAVLARSMI RDGNICLLRH EQLKTLYPVF NAISIPGRVV VSFGSELDFQ GAAPPGVADR ASFAEYSGYL ETLTGARRVT DQDDRWNWIE NNVLPVWNAI DSTYATSPHL ERKLREMAGG NPSMLQQIAR FASTMSFLPG LE
|
| |