| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1483 |
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| Symbol | |
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| ID | 6460683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1621961 |
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| End bp | 1623220 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642725472 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002016150 |
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| Protein GI | 194334290 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.377405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAA AAACCAGCAA AAACCGACGA CGAAATACCC TGCTGATCAT TGCCGCTCTT
ATTGCCGCCA TTGGGGGCGC CATTGGCTTC TGGTTGGCCA ACAAAGAGAG AGTTATTGAG
GTATCAACTG AAAAAGTGTT CATAAAAGAG GTTATCCACT ATGTCACCGC TACAGGAAAA
ATAGAACCCG AAATAGAAGT CAATCTCTCG CCGGACGTAT CGGGAGAAAT CACCGAGCTT
CCGGTCAGCG AAGGCGAGCA TGTGGAAAAA GGGACGCTCC TGTTCAAAAT ACAGCCGGAC
GTCTACGTCA ACCAGGTCGA ACAGAACAGA GCGCGCCTCA ATCTCGCCCG TTCACAACGT
CTTGAAGCCC GCGCGAGAAA ACTCAAATCA GATGACGATT TCCGAAAAGC TTCAATGCTC
TATAATGAAA AGCTCATCTC ACAGAGCGAC TACCTTACCG CGAAAACCAA TGCCGAAGCG
GCCGCTGCAA TCCACGATGC ATCGATCTCC ACGATCAATC AGAATCAGAG CCTGCTCGAC
CAGTCCCTCG AGCAGCTCAA CAAAACCGTT GTCAAAAGCC CCATCGAGGG TGTCATTATC
GCGCTGAACA GCAAACTCGG CGAAAGGGTT GTCGGAACCG GGCAGTTTCC GGGCACCGAA
GTGCTTCGAA TCGCCAACCT GGACAGCATG CAGGTTGAAG TCGAGGTCAA TGAAAACGAC
ATCGTCAACG TCAACAAAGG CGACAGCGTC ATCGTCAGTG TTGATGCCTA CAGCGACAGA
ACATTCAAAG GTCTCGTCAG AGAGATATCA AATTCCGCCA TTACACAGTC CGCAGGAACA
CAGGAAGAGG TCACCAACTT TTCCGTTAAA ATCCGCATTC TGAACCATGA CCGCCTGCTC
AAACCCGGCA TGAGTGCGAC AGCCGACATT GAAACAGAAC GAGTTCAGGA CGCGCTTGTC
GTTCCGATTC AAAGTGTCAC GCTCAGAACC GATAACAGCT CCAGTGAGTC AGAGCAATCA
GACGAACAGT CTTCTGCCGA AACCCTGTCA CGCAACGACA GCGACAGCCG TCAGGGAGTG
TTTGTCATTG AGAGCAACAC CGCCCACTTC CGCCAGGTGG AGACCGGAAC GACAGACAAT
ACCCATATCG TCATCCTTGA AGGCCTCGAA CCAGGCGACG ATGTCGTATC GGGAAGCTAC
ACTGCCATAA CACGACAGCT CACGGACGGC AGCAGAGTCA AACGAAAGCA GAAGGAGTAA
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| Protein sequence | MPKKTSKNRR RNTLLIIAAL IAAIGGAIGF WLANKERVIE VSTEKVFIKE VIHYVTATGK
IEPEIEVNLS PDVSGEITEL PVSEGEHVEK GTLLFKIQPD VYVNQVEQNR ARLNLARSQR
LEARARKLKS DDDFRKASML YNEKLISQSD YLTAKTNAEA AAAIHDASIS TINQNQSLLD
QSLEQLNKTV VKSPIEGVII ALNSKLGERV VGTGQFPGTE VLRIANLDSM QVEVEVNEND
IVNVNKGDSV IVSVDAYSDR TFKGLVREIS NSAITQSAGT QEEVTNFSVK IRILNHDRLL
KPGMSATADI ETERVQDALV VPIQSVTLRT DNSSSESEQS DEQSSAETLS RNDSDSRQGV
FVIESNTAHF RQVETGTTDN THIVILEGLE PGDDVVSGSY TAITRQLTDG SRVKRKQKE
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