| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1480 |
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| Symbol | ddl |
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| ID | 6460515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1618791 |
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| End bp | 1619873 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642725469 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_002016147 |
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| Protein GI | 194334287 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.351068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACTC ATCGTGTCGC TCTTATTTTC GGTGGCCAGT CGACAGAACA TGAAATTTCA
ATTATTTCCG CCCGAGCCAT AGCCAACCAC ATCGACACGG AGGCTTATGA ACTCTATCCT
ATCTATGTCG GACACGACGG CGCATGGTTC AAGGGAGAAA CCGCGCAAAA GGTACTTGAC
CTCGATATGC CGGCGATGCT GGCAAACACA TCTGCAGATA CGATCCGTGA GCGCCTCAGG
GAAATCTCCT TCAGCGATCC TCGCAACCGG TTTCTCTTCG ACTTTTCGGA AGAAGGCATA
GATGTAGCGC TGCCGATCAT TCATGGCTCG ACTGGCGAGG ATGGTAAAAT CCAGGGCCTG
CTCGATATGT TCTCTGTCCC CTACACCGGC TGCGGCGTCC ACGCCTCAGC AATGACCATG
GACAAAGAGA CCACAAAGAT ATGCGCTGAA CATGCCGGAC TTCATATCGC GCCGTATACC
ACCATCAGAA AGCTTCGGTA CCAGCAGGAC CCGCAACAGG TCGTATCGGT TATTCTCGAA
GAGTTTACGC TTCCGTTTTT TGTCAAACCC GCAAGCCAGG GCTCATCAAT AGGCATTACC
AAGGTTCATA GACCGGAAGA GCTTGCTGCG GCTCTCGAGA AGGCATTCAT GGTGGACACC
AAAGTACTGA TTGAAAAAAC TATAGAAGGC AGGGAAATTG AAGTCGCCGT CCTCGGCAAC
GACTCCCCCG TAGCGTCAGT TCCGGGTGAA GTCGAACCGG GAGGGGATTT CTATGATTTC
ACCGATAAGT ATATCAATGG AAAAGCCAGT CTGCATATTC CGGCAAGGCT GCCTGAAGAG
GTTCTGCAGA AGGTCAGCAC AGAGGCATTG AAAGCCTATC GGGCTCTTGA ATGCAGAGGA
ATGTCGCGAG TCGACTTTTT TATCGAACAC GCTACAGGGA AGATCATTCT CAACGAGATC
AATACCGTTC CGGGCTTCAC CGGCATCAGC ATGTACCCGA TGATGATGGA TGCTTCAGGC
ATCGACTTTT CGCAGCTGAT CGACCGGCTG CTGCAGCTTG CCTTGGAAAA AACATTGTCT
TGA
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| Protein sequence | MPTHRVALIF GGQSTEHEIS IISARAIANH IDTEAYELYP IYVGHDGAWF KGETAQKVLD
LDMPAMLANT SADTIRERLR EISFSDPRNR FLFDFSEEGI DVALPIIHGS TGEDGKIQGL
LDMFSVPYTG CGVHASAMTM DKETTKICAE HAGLHIAPYT TIRKLRYQQD PQQVVSVILE
EFTLPFFVKP ASQGSSIGIT KVHRPEELAA ALEKAFMVDT KVLIEKTIEG REIEVAVLGN
DSPVASVPGE VEPGGDFYDF TDKYINGKAS LHIPARLPEE VLQKVSTEAL KAYRALECRG
MSRVDFFIEH ATGKIILNEI NTVPGFTGIS MYPMMMDASG IDFSQLIDRL LQLALEKTLS
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