Gene Paes_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1454 
Symbol 
ID6460563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1588687 
End bp1589559 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content55% 
IMG OID642725441 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_002016121 
Protein GI194334261 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATT ACAACGAAAC CAGGCTGATG AACCCATTCG ACATTCCCGG CAAAAAAATG 
GGCTGGTGCC CCGGATGCGG CAACTACAAG ATTCTCGAAA CGCTCAAAGA GGCTCTTCAT
GAGCTCGGTA TCGACAGGCG AAACCTCGTG ATCGTCTCCG GTATAGGCCA GGCAGCAAAG
ACGCCGCAGT ATGTCGATAC CAACATGTTC AACGGTCTGC ACGGACGAGC CCTTCCCGCA
GCTCTCGGCA TCAAGCTTTC CAATCGCAAT CTGGTCGTGA TCGCCGAATC AGGCGACGGG
TGTATGTATG GAGAGGGCGG CAACCATTTT CTGCATGCCA TACGGCGCAA TATCGATATC
ACCGTGCTCG TTCACGACAA TATGATCTAC GGCCTCACCA AAGGTCAGGC ATCGCCGACA
TCGAGGATGG GAATGACAAC CCCGGTGCAG GTCAATGGCG TGATGCTCGA ACCCTTCAAT
CCTCTTGCTG TTTCGCTTGC GCTCGATGCA CCTTTTGTCG CCAGGGCAAG CGCCGGCGAC
GGAGCGCAGA CAAAAGAGAT CATCAAACAG GCGATCTCCT TCCGCGGACT GTCGGTGGTC
GATATCTTTC AGCCCTGCGT CGTGTTCAAC AAGCTGAACA CCTACCAGTG GTTCAAAGAA
AACACCTACT ATCTCCCCGA CGATTACGAT CCGACCGATC GTCAGCAGGC ATTCGCCAAA
TCCATCGAAA CCGAAAAGCT TCCCCTCGGG GTTCTTTACT GTCACGAAGG CCGAAAAGTC
TACGAAGACC TCCTCGGCAT CACCCGAACC CCCGCATACC AGCGCACCGT TTCCGACGAA
GCGTTTGAAA AGATGCTTGC GGCGTACCGG TAA
 
Protein sequence
MTDYNETRLM NPFDIPGKKM GWCPGCGNYK ILETLKEALH ELGIDRRNLV IVSGIGQAAK 
TPQYVDTNMF NGLHGRALPA ALGIKLSNRN LVVIAESGDG CMYGEGGNHF LHAIRRNIDI
TVLVHDNMIY GLTKGQASPT SRMGMTTPVQ VNGVMLEPFN PLAVSLALDA PFVARASAGD
GAQTKEIIKQ AISFRGLSVV DIFQPCVVFN KLNTYQWFKE NTYYLPDDYD PTDRQQAFAK
SIETEKLPLG VLYCHEGRKV YEDLLGITRT PAYQRTVSDE AFEKMLAAYR