Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1413 |
Symbol | |
ID | 6458958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1538648 |
End bp | 1539523 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642725398 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_002016081 |
Protein GI | 194334221 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0233391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0713718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG AAAAGATAGT ACCCGAGAGC AAGCCATCTC GGTTGCTGAT AAAAATCACC CGAGACACCT TACCGCAGGT GAAGGATAAA TACCCGTTTC TCTATCTTGA GCGAGGGCGT CTGGAAATAG ACGATAGCAG TATAAAATGG ATAGATTGCG ACTGTAACGT TGTCCGGTTA CCTGTGGCGC AGCTCAATTG CTTGTTGCTT GGACCGGGGA CTGCTGTTAC ACATGAAGCT GTAAAAGTTA TGGCAGCAGC AAATTGTGGT ATATGCTGGG TCGGGGAAGA TAGTCTGATT TTTTATGCCG CAGGACAGAC GCCTACAAGT GATTCTCGGA ACTTTCGACG GCAAATGGTG TTGTCTGCCG ATCCTGAAAA ATCTCTTAAA GTTGCTCAGC GCATGTTTGC CCGCAGATTT CCTGATGCGA AACTTGAGAC TAAGAGCCTT CAGCAAATGA TGGGAATGGA AGGGTTGCGT GTTCGTCAAC TTTATGTACA AAAAGCTCAA GAATACAAGG TGGGCTGGAA GGGACGACAA TTTACTCCTG GAAAGTTTGA AATAGGGGAT ATAACTAATA GAATTCTGAC ATCATCAAAT GCAGCTCTAT ATGGTATAAT TTGTTCTGCT GTTCACAGTA TGGGTTATTC TCCACACATG GGTTTTATAC ATACAGGTAG TCCGCTGCCA TTCGTTTATG ATTTGGCAGA TTTATACAAA GAGAATCTCT CGATTGATCT CGCCTTTCGA TTGACGGCGT TGATGGCCGG AACTTATGAT AGGCACAAAA TTGCTACTGA ATTTCGCAGG AGAGTTATTG AGATGGATCT TCTTGCTCGT ATTGGGCCTG ATATTGAAGA AATGCTTGGG AGGTAA
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Protein sequence | MKTEKIVPES KPSRLLIKIT RDTLPQVKDK YPFLYLERGR LEIDDSSIKW IDCDCNVVRL PVAQLNCLLL GPGTAVTHEA VKVMAAANCG ICWVGEDSLI FYAAGQTPTS DSRNFRRQMV LSADPEKSLK VAQRMFARRF PDAKLETKSL QQMMGMEGLR VRQLYVQKAQ EYKVGWKGRQ FTPGKFEIGD ITNRILTSSN AALYGIICSA VHSMGYSPHM GFIHTGSPLP FVYDLADLYK ENLSIDLAFR LTALMAGTYD RHKIATEFRR RVIEMDLLAR IGPDIEEMLG R
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