| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1412 |
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| Symbol | |
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| ID | 6458890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1538340 |
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| End bp | 1538645 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642725397 |
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| Product | CRISPR-associated protein Cas2 |
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| Protein accession | YP_002016080 |
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| Protein GI | 194334220 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00285914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0632504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGATTG TTGTCGCTAA TGATATTCCG CCTGCAGTAA GGGGGCGAAT GAAACTCTGG
TTTGTGGAGC CGCGAGCAAA TGTTTTTGTT TCTGGAATAA AAGATTCTGT TGCTAAAAAA
GTAATAGACT ATTTGCATAA GCACTGTCCG TCTGAATCCG GACTTATGGT GTTCAAAAGT
TGCAATGAAG CACCAGGATA TGAGATTTTC GGCCATGGTG ATACTCGTAA GCAGTTGATT
GAACTTTCAG GAATGCAACT CGTTATTGAG AAGTATTCTG AACCCAATCG AGAATCAAAA
ACATGA
|
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| Protein sequence | MVIVVANDIP PAVRGRMKLW FVEPRANVFV SGIKDSVAKK VIDYLHKHCP SESGLMVFKS
CNEAPGYEIF GHGDTRKQLI ELSGMQLVIE KYSEPNRESK T
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