Gene Paes_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1393 
Symbol 
ID6460637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1512229 
End bp1512675 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content49% 
IMG OID642725378 
Productprotein tyrosine phosphatase 
Protein accessionYP_002016061 
Protein GI194334201 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0172641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.707508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA AACCAAAAGT ACTCTTTCTC TGTACAGGAA ATGCAGCTCG CAGTCAGATG 
GCAGAAGGAC TTCTGCGCAC CATGGCTGGC GAGCGCTTCG AAGCGTTGAG TGCAGGGAAT
GATCCTGCCT CGTCAATCCA TAGCATGGCT GTGAAGGTTA TGCTCGAAAA AGGAATCGAT
ATCTCCACTC AGCACCCGAA AGACCTGACA TTGTTTCTCG GCAAGGAGTT CATCAATTAC
CTGGTTGTAC TCTGCAACAA AACTCATGAA ACCTGCCCCA GAATATGGCC GGGGCTCCTT
GTTGAAGAAA ATCGCCTGTA CTGGCCTTTT GACGATCCGG CAGCTGCAGA AGGAAACGAA
GAAGAGAGAG CTGAGGTATT CAGAGCAATC CGGGATGAGA TAGAGCAGAA GCTTGCCGAA
TGGATCGCTC ATATCGATGC AGGATAA
 
Protein sequence
MSKKPKVLFL CTGNAARSQM AEGLLRTMAG ERFEALSAGN DPASSIHSMA VKVMLEKGID 
ISTQHPKDLT LFLGKEFINY LVVLCNKTHE TCPRIWPGLL VEENRLYWPF DDPAAAEGNE
EERAEVFRAI RDEIEQKLAE WIAHIDAG