Gene Paes_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1346 
Symbol 
ID6460308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1466980 
End bp1467576 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content51% 
IMG OID642725330 
Productcobalamin (vitamin B12) biosynthesis CbiM protein 
Protein accessionYP_002016015 
Protein GI194334155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0137458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.05881e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCATATTT CAGAAGGTGT TCTGCCGCTT GCTACACTGG CTGCAGGCTA TGCAGTAAGT 
ACCGGAGGCA TAGCCATCGG CCTTCAAAAA ATCCGGGATG ATGAAATGGT TAAAACCGCG
ATGATCTCCT GCGCCTTTTT TCTTGCTTCG TTCATTCACA TTCCCGTTGG CCCTGCACAT
ATCCATCTCG TGCTCAACGG ACTGGCTGGA CTTCTTTGTG GATGGTCGGT GTTCATCGCT
ATCGCCATAG CCCTGTTGCT TCAGGCTCTC CTCTTCCAGT TCGGAGGCAT CACAACGCTC
GGCATCAACA CCCTCAACAT GGCGCTGCCT GCGCTATGCT GTTTTCTGAT CTTCGCTCCT
CTCCTTGCCC GGAAGAAACT CTCCCCTGCT GTAGCAGGAT TTTTCTGTGG CACGCTCTCT
GTCTTTTTAA GCGCGATCAT GCTCAGCCTC TCGTTGATCA GTGCAGGAGA AGCCTTTCTT
CCAACGGCAC AACTTATTTT TGTCTCGAAT ATACCGCTCA TGATCATCGA CGGCCTTCTG
ACCGGTGCGG CATTGCAGTT TATCAGAACA GTAAAACCCG AAATGCTTGG ATTATGA
 
Protein sequence
MHISEGVLPL ATLAAGYAVS TGGIAIGLQK IRDDEMVKTA MISCAFFLAS FIHIPVGPAH 
IHLVLNGLAG LLCGWSVFIA IAIALLLQAL LFQFGGITTL GINTLNMALP ALCCFLIFAP
LLARKKLSPA VAGFFCGTLS VFLSAIMLSL SLISAGEAFL PTAQLIFVSN IPLMIIDGLL
TGAALQFIRT VKPEMLGL