Gene Paes_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1344 
Symbol 
ID6460297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1465552 
End bp1465995 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID642725328 
Productputative transcriptional regulator, CopG family 
Protein accessionYP_002016013 
Protein GI194334153 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.23092e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.08063e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAACGAT TCGGCGTCTC CCTCGAAGAT GAACTGCTTG AACAGCTTGA CTCGCTGGTA 
CAGCACCACC GTTTTCCAAA CCGCTCTCAG GCCATCCGCT ATCTGATCCG CAAGCACAAC
AGAGACGAGT ACTGGGAGAG CAATGAAGCG GTCTGTGGCT GTCTTGTCCT CGTCTACGAT
CACCACCGAT CAGACCTCCA GAAAAGGCTC ACATCCATAC AGCATGAGTT TCACAACCTC
GTACTCTGCA GTCAGCATGT CCATCTGGAC CATAACAACT GCCTCGAAAC CATTACCCTC
AAAGGCAAGG CCATCGATAT AGGAGAACTT GCCGACAGAC TGATTGCCCT GAAGGGAATT
GTTCACGGAG AACTGGTCAA AGGGGGCGCA GTGAACGCTG GTCTGGAGAA CCCGGATCAT
CGGCATGAGA AATGCAACCC ATGA
 
Protein sequence
MKRFGVSLED ELLEQLDSLV QHHRFPNRSQ AIRYLIRKHN RDEYWESNEA VCGCLVLVYD 
HHRSDLQKRL TSIQHEFHNL VLCSQHVHLD HNNCLETITL KGKAIDIGEL ADRLIALKGI
VHGELVKGGA VNAGLENPDH RHEKCNP