| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1218 |
|---|
| Symbol | |
|---|
| ID | 6460171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1327912 |
|---|
| End bp | 1328625 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642725208 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002015893 |
|---|
| Protein GI | 194334033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000185377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000126486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC CTTTCGATAC CAGCAACATC CAGCTCTATG ATATAGTCCT CATGATCATG
GGCACGCTGC TTTTTATTGC CTGCCTCATC ATTTTTGTCA TCCAGTCGAT TCAGACAAAG
GTGTCAAAGA CTCTCATTGC ATTCTTTGCA CTGTCAATTA TTATGGTCGG ATTCCCTGCT
ATCACAAAAA TTCAGGTTGG AGAGCAATTC ACGCTGGAAA AACAACTGAG AAAAACAGCT
AAAATAATAG CAGCAGGCAA TACAAAACCG GCAACCATTA AAGAGTTCCG TACAACCCTT
GCCAGCATGG AAAAAAGCGG CAGCCCCATA GAAGATCCGG AACTGCTGAC AAGCATTGCC
CGCGCCCAGT ATGAGATCGG AGAGGTAGAT ATGGCTAAAA CCTACACACA GCAGGCACTG
GAGATCAACA GCAGCTATTT GCCTGCCCTT CAACTTCAGA ATATAACAGT ACAGCACGAC
CGAAAAAGCG ATTCACTGGC AACAAGCCTG GAACGGGCAG CAGCTCCAGA CGCATCTGCA
GCTGACAGCG CCAATGTGAA AGCAATCATC AGCATGATCA ACAAAGAATC CGTCAAACTC
TCAAATCCGG AATTGCTCAA ACGGGCTGCT GCCTTTGAAA GTGAAACCGG CAATCGCGAA
GAAGCATCTC TCCTGCTTAA AAGAAGCAAA ACACTCGAAA GCATCGAACG GTAA
|
|---|
| Protein sequence | MNIPFDTSNI QLYDIVLMIM GTLLFIACLI IFVIQSIQTK VSKTLIAFFA LSIIMVGFPA
ITKIQVGEQF TLEKQLRKTA KIIAAGNTKP ATIKEFRTTL ASMEKSGSPI EDPELLTSIA
RAQYEIGEVD MAKTYTQQAL EINSSYLPAL QLQNITVQHD RKSDSLATSL ERAAAPDASA
ADSANVKAII SMINKESVKL SNPELLKRAA AFESETGNRE EASLLLKRSK TLESIER
|
|---|
| |