Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1187 |
Symbol | |
ID | 6458947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1296031 |
End bp | 1296786 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725178 |
Product | PASTA domain containing protein |
Protein accession | YP_002015863 |
Protein GI | 194334003 |
COG category | [S] Function unknown |
COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000264979 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.522072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA TGATGAAGAA AGCTGCAGTA ATGGTGGCCG TTTTATTGGT GCTGCTGTTG GCTGTGGTGC TTTTTATAGA TAAGGTTGTT ATGCCATCCT ATACTGCTCA CGGGACGTCG GTTCTGGTGC CTGATGTTCA GAAAATGCAG TACGACGATG CAGTACGGGC GTTGAGAAAA TCAGATCTGT CGGCAGGCAA AAGCTTCAAT GTGAGCTATA TTCGCGATAT TGACTCGAAT ATGGTTATCG CGCAGCGACC AGGTGCCGGC AGTACCGTCA AGCCTGGCAG AACGGTGTAT CTTGTCGTCA ATAAACGCGA AAAACCGGAG TTTACCATTC CCGACTTTTA CGGTAAGCCT CTTGATGAGG TCCGCCAGAC CCTCTCGCGT TTCGATATGA CGCTCAGGGA TGTACAGGAG CAGGTTGTCT ATGATCCTCT TGAGGATGGC AAGGTTTTAG GTCAGTCACT GCCGCCCTCG ACGGTCGTGA GTTTCGGCTC TTCGGTTTCG CTGATTGTCG GGAAGCTTGA GGAGAGCCCT GTCGCTGCCA AAATAGCTGT TCCCAATGTT CTGGGTCTTC TCTTGAATGA TGCGAGGCAG GATATTGTCG ATGCCGGACT CAATACCGGC AATGTGCTCT ATGAGTACTC TTCTATTCTT GTTCCTAACA CGGTGATTAA CCAGAAGCCT GCTGCTAACA GCCTTTCCGA GCCGGGGCGT GTTGTGGAAC TGACTATTGT CATAACTCCG GACTGA
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Protein sequence | MNTMMKKAAV MVAVLLVLLL AVVLFIDKVV MPSYTAHGTS VLVPDVQKMQ YDDAVRALRK SDLSAGKSFN VSYIRDIDSN MVIAQRPGAG STVKPGRTVY LVVNKREKPE FTIPDFYGKP LDEVRQTLSR FDMTLRDVQE QVVYDPLEDG KVLGQSLPPS TVVSFGSSVS LIVGKLEESP VAAKIAVPNV LGLLLNDARQ DIVDAGLNTG NVLYEYSSIL VPNTVINQKP AANSLSEPGR VVELTIVITP D
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