| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1144 |
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| Symbol | |
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| ID | 6459819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1247721 |
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| End bp | 1248686 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725135 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002015820 |
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| Protein GI | 194333960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000342468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.524577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGA AACCTCTCAT CATCGCGCTT GTCGTTCTGT TGGTTTCCGG TGCGGCAACT
GGAGTCTGGT TCATGGTGTT GAGCAAGAAG GAGCCGTCAG CCGAGTTTCG GTCTGTCACG
GCGATAACAG GAACGATCGA TGAAACGGTA TCGACCACCG GCGTTGTCGA ACCCCGCAAC
CGGCTCAAAA TCCAGTCATC CATCGCAGGG CGTGTCGAGG AGATTCTTGT CAGCGAGGGT
GATATGGTCA ATCAGGGTGA ACAACTTGCT CTTGTGAGTT CAACCGAGCG CGCAGCACTG
CTCGATGCCG CAAGGCTTCA GGACCCCGGC GAGCAGGCGT ATTGGGAAAG GGTCTACAAA
AAAACAGTGA TCCTTTCGCC TATCGACGCT CAGATTATTG TCAGGAGTAT CGAACCCGGG
CAGACGGTGA CAACGAGCGA TTCGCTTTTT GTTCTTTCCG ACCGCCTGAT TGTCAAAGCC
TATGTCGACG AAACCGATAT CGGCCGGATC GCCATCGGCC AGAAAGCCGA CATCAGCCTC
GATGCCTACC CTGATATCCG GGTGGGTGGA ACGGTAGAGC ATATTGACTA TGAATCTCAT
CTTGAGAGCA ACGTCAATAT CTACTATGTC GATATCATTC CCGAAACAAT TCCCGATGTT
TTCCGTTCAG GTATGAGTGC TGATATCGGG ATTACAGTTC AGGAAAAGCA GAACGCGGTT
CTTCTGCCGA TCGAAGCGGT GCAGACGGTT GATGGTATGA CGGTCGTGCT TGGTGCGAGC
GCCGACGGCA TGAGCCCGGC CTCTTATAAG CCGGTGACGA CCGGCCTTCA GGATGAGGAG
CATGTCGAGA TTGTCGATGG GCTTCAGGCC GGAGATATCG TTCTTTTGTC CGGCGGTTCC
TTTGCGCTTC CTGTCAGTAA TGGCGGCGGA TCGAGTCCGT TCATTCCCCA ACGAAGAAAA
CGATAG
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| Protein sequence | MNKKPLIIAL VVLLVSGAAT GVWFMVLSKK EPSAEFRSVT AITGTIDETV STTGVVEPRN
RLKIQSSIAG RVEEILVSEG DMVNQGEQLA LVSSTERAAL LDAARLQDPG EQAYWERVYK
KTVILSPIDA QIIVRSIEPG QTVTTSDSLF VLSDRLIVKA YVDETDIGRI AIGQKADISL
DAYPDIRVGG TVEHIDYESH LESNVNIYYV DIIPETIPDV FRSGMSADIG ITVQEKQNAV
LLPIEAVQTV DGMTVVLGAS ADGMSPASYK PVTTGLQDEE HVEIVDGLQA GDIVLLSGGS
FALPVSNGGG SSPFIPQRRK R
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