| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1143 |
|---|
| Symbol | |
|---|
| ID | 6459134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1245753 |
|---|
| End bp | 1247714 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642725134 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002015819 |
|---|
| Protein GI | 194333959 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.229831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.618242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGC TGAAAGACAT CTACCGGACC TATCAGATCG GGGAAAGTCC TGTCCGTGCG
CTCAGAGGCG TTTCCCTCTC TGTATGCAAG GGAGAGTTCA TAGCTATCAT GGGGGCTTCG
GGCTCAGGTA AATCGTCGCT GCTGCATATT CTCGGACTTC TTGACAAGCC GGACAGGGGC
GACTACCTGC TGTCCGGTCG TAACGTCAAG ACCATGAGCG AGGATGAACT GGCTTCCCTG
CGCAACAATG TCGCCGGTTT CGTGTTTCAG CAGTTTCACC TGCTCAAGCG CATGAGCATT
ACCGATAATG TCCGCCTGCC GCACATCTAC AGTGGCAGGA AAGGGGATTT CAGAAAAGAG
GCAATCGAAC GGCTTGCGAC AGTCGGTCTT CAGGACCGTC TTGATCATTC CCCAAACCAG
CTTTCCGGCG GAGAACAGCA GCGTGCAGCT ATTGCCCGCG CTCTGGTTCG CGACCCTCTT
ATGATTTTTG CCGACGAACC CACGGGCAAT CTCGATTCGA AGAACTCTGC AGAAATTATG
CACATTCTCA AGCGTCTTCA CGAAGAGGGC AAAACCATCA TTATGGTGAC GCATGAGAAT
GACATAGCAG CCTATGCTGA TCGTATCATT ATCATGCGTG ATGGTCAGAT TCTGAGCGAT
GAACGCAAAA GCGGCTGCGA AATTCCTGAA CAGGACGCTG ATAATGGGGT TGATGTTCGT
GCGGATCTGA AAATTTCTTT ATGGCGCAAC GGTCGTTTCA GCGGATTTCT CCTGCAGGCG
CTCCAGTCGA TGTTGTCCAA CAAGGTTCGC TCGTTTCTCT CTGTGCTCGG TATTCTTGTC
GGCGTAGCAT CGGTTATCGC CATGATGGCC CTTGGAGAAG GAGCCAAAGC ATCGATGCAG
GAACAGCTCA AATCAATGGG TTCTAACCTG CTCTCTGTTC GTGGCGGATC GGCAAAGATT
CGCGGGGCAA CCCAGGGCGC GGGAGCGGTT ACCCGTTTCA CCTTACGCGA TGTTGCCGAT
ATTGCGGCCT TGTCAAGCGT CGTCAAGCGT GCAGCGGGGA CCGTCAGCGG CAGCGCACAG
CTTGTCTATG CCAATAACAA CTGGAGCACC TCTCTCGATG GTGTCGGCAT ACAGTACGGC
GACATGCGCT CGTCGATCCC TTCCGTTGGT CGTTGGTTTA CGACAGATGA GATCGGCAAA
CGTGAAAAAG TGGCCATTAT CGGCGTAACG GTGGTCAAGG AACTTTTCGG AAACACCAAT
CCCGTTGGCA AGACCATCAA GATCAACAGG ATCAATTTCA AGGTTATCGG CGTTGCCCCT
GCCAAAGGCT TTGCCGGCCA TCGCGACGCA GACGACGTTG TGATGATCCC CGTCTCGACA
GCCATGTACC GTGTGCTCGG CAAGGACTAT CTTGACCGTA TTTACGTCGA AGCAGCCTCT
CCGTCTTTGA TAGATGCAGC CAAAACAGTT GTTGGGCAGG TGATCCGGAA ACGTCACCGT
CTGAAGGAGA GCGACGAATC CTTCTCTATC AGGGATATGA CCGAGATCCA GCAGATGATG
ACCAGCACGA CGGAGACCAT GAGCCTCCTG CTCGGCTCGA TAGCCGCTAT CTCGCTTGTC
GTCGGGGGTA TCGGCATCAT GAACATCATG CTGGTATCCG TGACCGAGCG CACCAGAGAG
ATAGGACTTC GCAAGGCGAT AGGTGCCAGG AAATCAGACA TCATGCTGCA GTTTATCGTT
GAATCCGTCG GCATGACCCT CACCGGAGGT CTGATCGGCA TCGCTGCCGG TGCAGGCGTT
TCGTGGGCGT TATCAGTGTT TGCCGGATGG AGTGTCAAAA CATCTCTCTT CTCCGTTCTT
CTGGCTACAA CGTTTTCCAT GCTTATCGGT CTCTTTTTCG GGCTCTGGCC TGCAAGGAAA
GCTGCCGACC TCAAACCTGT CGAAGCGCTG CGCTACGAGT AA
|
|---|
| Protein sequence | MIELKDIYRT YQIGESPVRA LRGVSLSVCK GEFIAIMGAS GSGKSSLLHI LGLLDKPDRG
DYLLSGRNVK TMSEDELASL RNNVAGFVFQ QFHLLKRMSI TDNVRLPHIY SGRKGDFRKE
AIERLATVGL QDRLDHSPNQ LSGGEQQRAA IARALVRDPL MIFADEPTGN LDSKNSAEIM
HILKRLHEEG KTIIMVTHEN DIAAYADRII IMRDGQILSD ERKSGCEIPE QDADNGVDVR
ADLKISLWRN GRFSGFLLQA LQSMLSNKVR SFLSVLGILV GVASVIAMMA LGEGAKASMQ
EQLKSMGSNL LSVRGGSAKI RGATQGAGAV TRFTLRDVAD IAALSSVVKR AAGTVSGSAQ
LVYANNNWST SLDGVGIQYG DMRSSIPSVG RWFTTDEIGK REKVAIIGVT VVKELFGNTN
PVGKTIKINR INFKVIGVAP AKGFAGHRDA DDVVMIPVST AMYRVLGKDY LDRIYVEAAS
PSLIDAAKTV VGQVIRKRHR LKESDESFSI RDMTEIQQMM TSTTETMSLL LGSIAAISLV
VGGIGIMNIM LVSVTERTRE IGLRKAIGAR KSDIMLQFIV ESVGMTLTGG LIGIAAGAGV
SWALSVFAGW SVKTSLFSVL LATTFSMLIG LFFGLWPARK AADLKPVEAL RYE
|
|---|
| |