Gene Paes_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1086 
Symbol 
ID6459693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1196110 
End bp1196778 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID642725083 
ProductABC transporter related 
Protein accessionYP_002015768 
Protein GI194333908 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.76035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAT TGCTAACTAT CGAGCATCTC TGGTTTTCCT TCAGCCCGAC AGGCGCGCCA 
TTGTTCGAAG AGCTCGATCT GCGTGTCGAA ACCGGAGATT TTGTTCTTCT CAGGGGCGTG
TCCGGAAGCG GTAAATCGAC CCTGCTTCGC CTGATCTGTC GGTTGCAGCC CTTCTCGAAA
GGGCGTATTT TGTTTAAAGG AGTGCCTGTC GATGCATTGA AGCCACCCGA ACTGCGACGT
CAGGTCTTGT ATGTCGCCCA GATCCCCTCA ATGATCGATG ACACTGTGAA GGCCAATCTG
CTTTTTCCTT TTTCCTTTTC AGTCAACAGC GACAAGCAAG CCCCTGATGA TCATGAGTTA
ATCAGGATGC TCTCGGATTT CTATCTTCAG GATATTACTC TTCAGCAGCC TGCGCTCAAT
CTCTCTGTCG GGCAGCAGCA GCGGGTGGCA TTGATGCGGG CGCTCCTGCA GCAGCCGGAA
ATACTTCTGC TGGACGAACC CACCTCAGCC CTTGATGCCG ATAGCGCTGC CATGGTATTC
AGTATTATTG AGACGTTGAA CCGGGAGAAA GGGATGACGA TCATCTGTGT GACGCACAGC
GATTACAGGC CTGAAACGGT TGAACCTGCT CTGTATATTC TCAAGAACCG CACATTTCAT
CGTTTATGA
 
Protein sequence
MEPLLTIEHL WFSFSPTGAP LFEELDLRVE TGDFVLLRGV SGSGKSTLLR LICRLQPFSK 
GRILFKGVPV DALKPPELRR QVLYVAQIPS MIDDTVKANL LFPFSFSVNS DKQAPDDHEL
IRMLSDFYLQ DITLQQPALN LSVGQQQRVA LMRALLQQPE ILLLDEPTSA LDADSAAMVF
SIIETLNREK GMTIICVTHS DYRPETVEPA LYILKNRTFH RL