Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1084 |
Symbol | |
ID | 6459660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1192706 |
End bp | 1193353 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725081 |
Product | protein of unknown function UPF0016 |
Protein accession | YP_002015766 |
Protein GI | 194333906 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.517367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAT TTTGGCTTTC TCTGGTTATG ATTTTTATAG CGGAGCTGGG GGATAAATCC CAGCTTTTAG CGCTCAGCCT CGCGACATGC TACAATACAA AAGTTGTCCT CTGGGGTATT TTCTTCTCAA CGCTGGCTGT CCATGTGTTC TCTTCAGCGA TCGGGTCGTT TATGGGCGGT CTGCTGCCGA CCGACTGGAT CATGTTCGTT GCCGGTTTAT CGTTTATTGC CTATGGTTTC TGGACGTTGC GCGGTGATGC TCTCGATGAT GAAGATGCTT CCTGTAAACG TACGATTCAT CCGTTCTGGC TTGTTTTTAC GACCTTTTTC ATGGCAGAAC TTGGCGACAA GACAATGCTG GGCACCGTCA GCCTTGCGAC AACGAATCCG TTTCTGCCAG TCTGGATCGG CTCCACGTTA GGTATGGTCA TCTCCGATGC CCTTGCAATA GGTGTCGGTA AAATCCTCGG TAAAAACCTT CCGGAGCAGA CGGTTAAAGT CGGCGCCGGA ATGATCTTTT TTGTGTTCGG AGGGTTGACG ATGTATGAAG GAGGCAAAGG ATTCAGTCCG GTCGTATGGG CTTCGGCGGG TGCCGTTATT GTCCTCATGG GAGTACTGTT TCTCAGGCAT CGTCAATCGC AGGTCTGA
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Protein sequence | MDAFWLSLVM IFIAELGDKS QLLALSLATC YNTKVVLWGI FFSTLAVHVF SSAIGSFMGG LLPTDWIMFV AGLSFIAYGF WTLRGDALDD EDASCKRTIH PFWLVFTTFF MAELGDKTML GTVSLATTNP FLPVWIGSTL GMVISDALAI GVGKILGKNL PEQTVKVGAG MIFFVFGGLT MYEGGKGFSP VVWASAGAVI VLMGVLFLRH RQSQV
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