Gene Paes_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1084 
Symbol 
ID6459660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1192706 
End bp1193353 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID642725081 
Productprotein of unknown function UPF0016 
Protein accessionYP_002015766 
Protein GI194333906 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.517367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TTTGGCTTTC TCTGGTTATG ATTTTTATAG CGGAGCTGGG GGATAAATCC 
CAGCTTTTAG CGCTCAGCCT CGCGACATGC TACAATACAA AAGTTGTCCT CTGGGGTATT
TTCTTCTCAA CGCTGGCTGT CCATGTGTTC TCTTCAGCGA TCGGGTCGTT TATGGGCGGT
CTGCTGCCGA CCGACTGGAT CATGTTCGTT GCCGGTTTAT CGTTTATTGC CTATGGTTTC
TGGACGTTGC GCGGTGATGC TCTCGATGAT GAAGATGCTT CCTGTAAACG TACGATTCAT
CCGTTCTGGC TTGTTTTTAC GACCTTTTTC ATGGCAGAAC TTGGCGACAA GACAATGCTG
GGCACCGTCA GCCTTGCGAC AACGAATCCG TTTCTGCCAG TCTGGATCGG CTCCACGTTA
GGTATGGTCA TCTCCGATGC CCTTGCAATA GGTGTCGGTA AAATCCTCGG TAAAAACCTT
CCGGAGCAGA CGGTTAAAGT CGGCGCCGGA ATGATCTTTT TTGTGTTCGG AGGGTTGACG
ATGTATGAAG GAGGCAAAGG ATTCAGTCCG GTCGTATGGG CTTCGGCGGG TGCCGTTATT
GTCCTCATGG GAGTACTGTT TCTCAGGCAT CGTCAATCGC AGGTCTGA
 
Protein sequence
MDAFWLSLVM IFIAELGDKS QLLALSLATC YNTKVVLWGI FFSTLAVHVF SSAIGSFMGG 
LLPTDWIMFV AGLSFIAYGF WTLRGDALDD EDASCKRTIH PFWLVFTTFF MAELGDKTML
GTVSLATTNP FLPVWIGSTL GMVISDALAI GVGKILGKNL PEQTVKVGAG MIFFVFGGLT
MYEGGKGFSP VVWASAGAVI VLMGVLFLRH RQSQV