Gene Paes_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1079 
Symbol 
ID6459604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1188555 
End bp1189814 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID642725076 
Productprotein of unknown function DUF214 
Protein accessionYP_002015761 
Protein GI194333901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000107767 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCCG AGTTATATAT AGCAAGGCGC TTTGCCTTTA AGCAACGATC GACATCCAAA 
CCAACATTTA TCGTCATGAT CGCCGTGACC GGTATTGCGG TTGGTACGAC CGCACTGATC
CTGACATTGT CGATTGTCAA GGGGTTTTCG GTCAAGATCG AAGAAAAACT GGTAGCCTTC
AGTTCCCATA TGCAGGTTCG CCAGTCCGAC GGTCGGCTGT TTTATCCGCT CGATGCAGAT
ACCCGTCGTC TGAGTCATAT CGACAATGTG CTCTCGATTA CCCCTTTTAT GGAGAAAAAT
GTCATTCTTC AGAGCAGGAA AGGCAAAAAA ACCCTTATTC AGCCGGCCAT GCTGAAAGGC
TTCAATGCCG CAGAGACTCC GGACTTTTTG CGCGAGAGTA TTGTTGACGG GGAATCGATT
GCAGAAAGCG GCGGGAACAA TCTCGATATC CTGGTAGGAA GCTCTCTTGC CGAAACGCTT
GATATCGGAC CAGGCAGCAG GGTTCTGGTG ATCAGTACCT CGAAACAGGC GACAGGTGCT
TTGCTGGCTG GAAGCGATAC GATCGTTGAT CTTCTTTCAA ACATGGATCT TGAACTTGCT
ACGGTAAGGG GAGTCTATGA AACCGGTCTG AATGAAGGGT TTGATGATTA TATGGTCATC
GCTGATCTTG GTGCGCTGCA AAAGCATTTT CATCCGTCAC GCATAAGCGG TTATGAAATC
ATGGTCAACG ACCTGGCTCG TCTCAATGAA ACCACCAGGG CCGCAGCAGA TACGCTTGGC
TATCCCTTTT ACAGTTATAC TGTCTATGAG CGTTATGCAA ATCTGTTTGA ATGGCTGAAG
CTGCAGCAGA ATATTACCCC GCTGTTGATC ATTACCATTA CGATTGTCGC TGTTTTTAAT
ATCATATCAA CGCTTCTGGT GCTGATTATC GAAAAAACCC GTGAGATAGG GATGCTTATG
GCGCTGGGGC TTGGACCATC AAAGCTCAGC AGCATTTTTC TTTCACAGGC TTTTTTGATT
GCTCTGATAG GTATTGCTTT AGGCAATCTT CTCGCTCTGG GGTTTTCGGT ATTCGAACTG
CATTTTCATC TGATTTCTCT TCCTGAAAAG AACTATTTCA TCAAACATGT TCCGATATTG
ATCGACTTCC GGGATTATCT GCTTGTTTCT GCTGTGGTCG CATCGCTTTC GCTGCTCTTC
GCGTTCATTC CAGCGCGGGT TGCGGCATCG CTCAAGCCGG GAACCGCACT TTTGACATGA
 
Protein sequence
MKPELYIARR FAFKQRSTSK PTFIVMIAVT GIAVGTTALI LTLSIVKGFS VKIEEKLVAF 
SSHMQVRQSD GRLFYPLDAD TRRLSHIDNV LSITPFMEKN VILQSRKGKK TLIQPAMLKG
FNAAETPDFL RESIVDGESI AESGGNNLDI LVGSSLAETL DIGPGSRVLV ISTSKQATGA
LLAGSDTIVD LLSNMDLELA TVRGVYETGL NEGFDDYMVI ADLGALQKHF HPSRISGYEI
MVNDLARLNE TTRAAADTLG YPFYSYTVYE RYANLFEWLK LQQNITPLLI ITITIVAVFN
IISTLLVLII EKTREIGMLM ALGLGPSKLS SIFLSQAFLI ALIGIALGNL LALGFSVFEL
HFHLISLPEK NYFIKHVPIL IDFRDYLLVS AVVASLSLLF AFIPARVAAS LKPGTALLT