Gene Paes_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1024 
Symbol 
ID6460176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1126652 
End bp1127341 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content51% 
IMG OID642725023 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_002015710 
Protein GI194333850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.261083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAT CTGTTGCCGT TATCCCTGCA AGAGGGGGAT CAAAAGGTCT TGTCAATAAG 
AATATTTACC CTGTTGCAGG CAAGCCGCTG CTGGCGTGGT CGATTCTTCA GGCTAAAGCA
GCCGAGGGGA TCATTGAGGT GTTTGTTTCT ACAGACAGTC CGCTTATAGC TGACGTTGCT
ATTGAGTACG GTGCCAGGGT TATCGATCGC CCGCCGCACC TGGCTACCGA TACGTCCACT
TCTGAGGCGG CGCTTCATCA CGCTCTTGAG GAGATTGAGC AGCACCATCA GCTGCCTTCA
GACAGGGTTG TTTTTCTTCA GGCCACCTCT CCTCTCCGCT TGCCGGGGGA TATCGACAAT
GCGCTGCAGC TTTTTGTGTC AGAATGTGCC GATTCGCTGA TGTCTGTCAC AAGACCTGAC
GACCTGACGC TTTGGGAGAA ACGTGCGACC GGATGGGAGA GTGTCAATTT CGATTTTCGC
AACAGGGCAA TGCGCCAGGA CCGGCCGCAG CAGTATATTG AAAACGGTTC TATTTACATT
GTATCGAGAG ATGTTCTTGA GCGTGTCAAT AACCGTATAG GCGCTAAACT CTCGGTGTAC
TGCATGCAAT TCTGGCAGAC ATGGGAGGTC GACACCATTG AAGAAATAGA CCTGATCGAG
TTTTACATGC ACAAAAAAAA GCTGGTGTAA
 
Protein sequence
MNRSVAVIPA RGGSKGLVNK NIYPVAGKPL LAWSILQAKA AEGIIEVFVS TDSPLIADVA 
IEYGARVIDR PPHLATDTST SEAALHHALE EIEQHHQLPS DRVVFLQATS PLRLPGDIDN
ALQLFVSECA DSLMSVTRPD DLTLWEKRAT GWESVNFDFR NRAMRQDRPQ QYIENGSIYI
VSRDVLERVN NRIGAKLSVY CMQFWQTWEV DTIEEIDLIE FYMHKKKLV