| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1004 |
|---|
| Symbol | |
|---|
| ID | 6458913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1107781 |
|---|
| End bp | 1108608 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642725003 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_002015690 |
|---|
| Protein GI | 194333830 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA GCTACACCAC AGTGCTGAGC ATTGCAGGTT CCGATGGAAG CGGAGGCGCC
GGAATCCAGG CAGATCTGAA AACAATTGCG GCCCTGGGCT GTTACGGATT GAGCGCCATC
ACTGCGCTGA CGGCACAGAA CACCTGCGAC GTTGAATCGT TCACAGCGGT AGAGCCGGAA
TTCATCAGCC ATCAAATAGA TGTCCTGAAT AAAGACATCC GGATCGATGC CATCAAGATC
GGCATGCTCG GGAGTCAAAA AGCGATAGGA AGCATTGCCT GCAGCATCCG TAAAATGAAG
AGCCTCCGGC CGATCGTACT CGACACCGTA CTCATCTCAT CAAGCGGCAG CCATCTACTC
CCCGAAGAAA GTATCGATGA ACTCAAGCGC GAGCTCTTTC CTCTCGCCCG GCTCATCACT
CCAAACCTTC CCGAAGCATC GAAACTGACC GGCCGAACCG AACTCCCCTC ATCAAAAACC
GAAATCCGCA AGGTTGCCGA AAAACTTCTG ATAACAGGCC CTGAGGCCGT CCTGGTCAAA
GGCGGGCATA TGCAGGGAGA TCGCTGTGAA GACCTGCTTT TGAGCGGTAG AGAGGAACGG
TGGTTTTCCT CACCAAGGAT CAGCACTGTC AATACCCACG GCACAGGCTG TACCCTTTCA
TCAGCGATCG CTTGCTTTCT TGCAAAAGGC AGAGGGCTTG AAGACGCGGT TGCAGAAGGC
AGGAACTATC TTCTCGGAGC ACTTGAAGCC GGATCATTTT TCCATCTGGG AAAAGGATCC
GGGCCTCTTG ATCACCTCTA CCGGTACCGG CAGATGCCGG ACCGGTAA
|
|---|
| Protein sequence | MKKSYTTVLS IAGSDGSGGA GIQADLKTIA ALGCYGLSAI TALTAQNTCD VESFTAVEPE
FISHQIDVLN KDIRIDAIKI GMLGSQKAIG SIACSIRKMK SLRPIVLDTV LISSSGSHLL
PEESIDELKR ELFPLARLIT PNLPEASKLT GRTELPSSKT EIRKVAEKLL ITGPEAVLVK
GGHMQGDRCE DLLLSGREER WFSSPRISTV NTHGTGCTLS SAIACFLAKG RGLEDAVAEG
RNYLLGALEA GSFFHLGKGS GPLDHLYRYR QMPDR
|
|---|
| |