| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0954 |
|---|
| Symbol | |
|---|
| ID | 6460430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1051359 |
|---|
| End bp | 1055024 |
|---|
| Gene Length | 3666 bp |
|---|
| Protein Length | 1221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642724957 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_002015644 |
|---|
| Protein GI | 194333784 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.798871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCTA CATCGAATGA TCTTGATACT ATAGCGGAAA ACCCCGGGCC CACGGATCGG
GAAATACCGT TCAATTATAC CTCTGCAGGG GATATGCAGG CGCTCTCTCT TGTTTTTGAT
GAAGAGAACG TGCGTCTCCT TGAAGAATTA CGTGATCGGC GCGTCACAGG GCGTTCGGCG
CGTCTTCTGA TGCGCATTAT CGGTGAACTC CTGATTCACC GGCGCAATCC CTATCTCTAC
CAGGAACTTA TCGACTCACA TGCCCGAAGG GTCAGGTTGT TTGAGCATGC TCTCAAGGAC
CTCGACATCA TCGAGTCGAC GTCAAACGGC GAATCGAGGG TGCTGGCTAT CGTCTCGAAC
CTGAGAAAGT ACTTTTTTGG ATTTCGAGAG GAGATTGAAC AGGCTCCCGA CTTCCGGAGA
AAAGTCAAAA AAGAACTGGG GGCAATTGTC GGTGTCGACA ATGTCCTTTT CGACCCTTTT
TCACTGGTGT CTCATGCTAC TGATGCGACG GACTGGAGAC TTTTTCTCCC GGTGGCAGTC
GTTACACCCG ACAACGAGGA GCAGGTTGCT CCGCTTGTTG CAGCTATTGC TGCTCTCGGT
TTGAAAATCA TTCCACGAGG CGCCGGCACA GGATTGACCG GTGGCGCGGT TCCGCTTCAG
CGGGACTGCG TTATCATCAA TACCGAAAAG CTCAACCATA TCAGGGGGAT CACCTATCGC
GAGTTTGTCG ATGATAACGG CATCAGCGCA GAGGCTCCCG TTATCGAGGT TGAGGCCGGT
GTTGTTACCG AAAAAGCTAT GACTTTTGCC GGAGAACAGG GCCTTGTTTT TGCCACGGAT
CCTACCAGTG AGTGGTCGTG TACGATCGGG GGCAACATTG CTGAAAATGC GGGTGGTAAA
AAGGCTGTCA GGTGGGGGAC ATGTATCGAT AACCTTGTCG AGTGGAAGAT CGCGATGCCC
TCAGGAGAGA GCTGGAGTGT CCGGAGGACC GACCATCGAC TGCGTAAAAT CATGCATGAG
GATACCGTTA CCTATGAAAT CGTCGACAGT CAGGGCGACA TTCGAAACCG TATTGAACTT
CTTGGTACCG ATATTCGCAA AAAGGGTCTC TGGAAAGACA TTACCAACAA GGCTCTCGGA
GGCGTTCCCG GTCTGCAGAA AGAGGGTACC GACGGCGTTA TCACGTCGGC TCATTTTATT
CTCTATCCGA AATACGAGGT CACAAAAACC CTCTGTCTCG AGTTTTTCGG ACCTGATATG
GACGAAGCAA GCCGCGTCAT CGTCGAACTT TCAAAAATAT TTCCGCTTCC GGCCAATGAC
CACGAAGCGC TGCTTGCGCT TGAACACTTT GACGATGAAT ACATCCGCGC AATTGATTAC
AAGGTGAAAG CTGCCAGACC GCAGATGCCA AAAGCGGTCC TGCTGATCGA TATAGCAGGT
CATTCATCAG ATGAGGCCCA GGCAGGGGTG GATCGTGTTG CAGAGCTCCT CGAGCGTCAT
CCCAACACTC TGATGTTCGT TGCCCGCGAC AGTGCAGAAG CAAAGCGTTT CTGGGCGGAC
AGAAAAAAAC TCAGTGCGAT TGCGCGGCGC ACCAATGCGT TCAAGCTTAA CGAGGATATC
GTTATTCCTC TTGAGGCGCT TGCTGAATTT GCCCGTTTTA TCGATGAGCT CAATATCGAC
GAGGAGCGTC ATTCACAGCG TCTGTTCATC GAGCGTGTCG AGCAGCTTCT TGGGGAGCCG
CAGGCCAAAG ACGATACCGA GCAGTTTGCA GCAAAGGTTC CTGCAGCCAT GGATCTCTGC
CGTTCGACAA GAGAGGCGCT TGGCGGTGCT GATGAAAAGT CGCTCAGAAG CTTCTGTCTG
ATTCAGGAGT TTCGTCATGA GTTCAATGAA CTTTTTCACG GTTATCCCGA TACGGTCTCT
CGCATTGACG CGGCATTCCA GTATGTCAGG GACCGGCGAA TCGTCATCGC GACCCACATG
CACGCCGGTG ACGGTAACGT CCATGTCAAT ATTCCCGTAC TCTCAAATGA CCAGCCGATG
CTGCAGCGGG CAGATCATGT CGTTGACCGT GTGATGGAAA AAGTCATTTC ACTTGGTGGC
GTTGTGTCGG GCGAGCACGG AATCGGGGTG ACGAAACTCA AGTTCATGGA GCCGGAGCGT
ATTGAGGAAC TGACCCGCTA TCGCAACAGT GTCGATCCTC AGGGGATTAT GAATCCGGGA
AAACTTCAGG ACTACAATGC CCTGCGTTAT ATTTTCACGC CCTCATTCAA TCTTCTCGAA
CTTGAAGCCC ATATTCTTAA ACGGGCGCAG CTCGAAGAGC TGTCGAAAAA GATCGACTAC
TGTATTCGTT GCGGCAAATG CAAGACAGAC TGCTGCGTTT ACTATCCTGC AAGAGGGATG
TTCTACCATC CGAGGAACAA AAACCTTGCC ATCGGTTCTC TGATTGAGGC CATGCTCTAT
GACGCACAGC GTGAAAGAAA AACAGATTTT GAGCTTCTTC GCTGGCTTGA AGAGGTCGCA
GATCATTGCA CAATCTGCCA TAAGTGCCTC AAACCCTGTC CGGTAGATAT CGATACAGGC
GAGGTTTCCG TGCTGGAGAG GAGCATTCTT CAGGGGTGGG GTTATAAACA TTCCTCGCCG
ATAACGCAGA TGACGCTCCG CTACCTTGAC AACCGTTCTC CGTTCTACAA CAAAGTGTTT
CGCAACGCTG TTGTTCGTAT TGGAGGAGCA GCTCAGCGTA TGGGCAATCG TCTTTCAGCC
CCGCTGCAGG ACCCTGAACA TCCGTCATCC ATCTATCCGC TGCGCATGAT GCGCTCGTCA
GTACCGCCGG TGCCAGCCGA TACGCTGCGC GATGTACTGC CGGCATGTGA GGCCGATCAG
GTGCTTGTTT TTGAACCGGA GCAGGAAACT GACCATACGG TATTCTATTT CCCCGGATGC
GGTTCGGAAC GCTTGAACTC GACTATTTCG ATGGCGGCAA TCCATCTCCT GCTTGAAACC
GGTGTCAGGG TTATTCTTCC GCCACCTTTT CTCTGTTGCG GCTTTCCGTC GCATGTCAAT
GCCCAGAACG ATCTCAATGC TCGCCTGGTC CTGCGTAACA CCATGATGTT CAGCCAGATT
CGCGAAATGT TTTCTTATCT CGAATTCGAT GCTTGCGTCA TTTCCTGCGG AACCTGCCTT
GAAGGACTTG AAAGCATGGA GACCAATAAA CTGTTTGGCG GCAGGATAAT GGATGTGATG
AGCTATGCCA TCGAACAGGG GCTCAGACTG GAAGGCGACG AGTCGTGCCT CTACCATGCG
CCATGCCACG ACTCTCTTGG CGGTAACGCG CTGGGCGAAT TACAGGCGAT GGGCGGTTTC
GATACGGTTA CCCCTGTTGA GCACTGCTGT TCGGAAGCAG GGACAATGGC TCTTTCACGC
CCGGACATTA CCGATTCTAT GCTGCATCGT AAGAGGGAAG CGATTTCCGA TTGCCTTGAA
CACGCCGGAT CGAGAAAGGT CATACTGACC AACTGTCCGT CTTGTGTTCA GGGGCTTGGC
AGAAGCCGTG ACCTCGGTAT CGAGCCGATG CATATGACGG TAGCTATTGC TGAAAAAATT
TCAGGAAGCA ACTGGAAAGA GCGCTTTCTC GCACAGGCAG CGCGGGCAAC AGCCGTGAGC
TTCTGA
|
|---|
| Protein sequence | MKATSNDLDT IAENPGPTDR EIPFNYTSAG DMQALSLVFD EENVRLLEEL RDRRVTGRSA
RLLMRIIGEL LIHRRNPYLY QELIDSHARR VRLFEHALKD LDIIESTSNG ESRVLAIVSN
LRKYFFGFRE EIEQAPDFRR KVKKELGAIV GVDNVLFDPF SLVSHATDAT DWRLFLPVAV
VTPDNEEQVA PLVAAIAALG LKIIPRGAGT GLTGGAVPLQ RDCVIINTEK LNHIRGITYR
EFVDDNGISA EAPVIEVEAG VVTEKAMTFA GEQGLVFATD PTSEWSCTIG GNIAENAGGK
KAVRWGTCID NLVEWKIAMP SGESWSVRRT DHRLRKIMHE DTVTYEIVDS QGDIRNRIEL
LGTDIRKKGL WKDITNKALG GVPGLQKEGT DGVITSAHFI LYPKYEVTKT LCLEFFGPDM
DEASRVIVEL SKIFPLPAND HEALLALEHF DDEYIRAIDY KVKAARPQMP KAVLLIDIAG
HSSDEAQAGV DRVAELLERH PNTLMFVARD SAEAKRFWAD RKKLSAIARR TNAFKLNEDI
VIPLEALAEF ARFIDELNID EERHSQRLFI ERVEQLLGEP QAKDDTEQFA AKVPAAMDLC
RSTREALGGA DEKSLRSFCL IQEFRHEFNE LFHGYPDTVS RIDAAFQYVR DRRIVIATHM
HAGDGNVHVN IPVLSNDQPM LQRADHVVDR VMEKVISLGG VVSGEHGIGV TKLKFMEPER
IEELTRYRNS VDPQGIMNPG KLQDYNALRY IFTPSFNLLE LEAHILKRAQ LEELSKKIDY
CIRCGKCKTD CCVYYPARGM FYHPRNKNLA IGSLIEAMLY DAQRERKTDF ELLRWLEEVA
DHCTICHKCL KPCPVDIDTG EVSVLERSIL QGWGYKHSSP ITQMTLRYLD NRSPFYNKVF
RNAVVRIGGA AQRMGNRLSA PLQDPEHPSS IYPLRMMRSS VPPVPADTLR DVLPACEADQ
VLVFEPEQET DHTVFYFPGC GSERLNSTIS MAAIHLLLET GVRVILPPPF LCCGFPSHVN
AQNDLNARLV LRNTMMFSQI REMFSYLEFD ACVISCGTCL EGLESMETNK LFGGRIMDVM
SYAIEQGLRL EGDESCLYHA PCHDSLGGNA LGELQAMGGF DTVTPVEHCC SEAGTMALSR
PDITDSMLHR KREAISDCLE HAGSRKVILT NCPSCVQGLG RSRDLGIEPM HMTVAIAEKI
SGSNWKERFL AQAARATAVS F
|
|---|
| |