| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0875 |
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| Symbol | |
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| ID | 6460590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 952780 |
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| End bp | 956025 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724878 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_002015567 |
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| Protein GI | 194333707 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.036821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGG AATTCAGCCC GGTCAGCAAA GAACAGTGGA AAGAGCGGCT TATACAAGAG
CTCAAAGGAA GCGATTATGA AACAATCGTC TGGCAAACCC CTGACGGCTT CAGCCAGGAA
CCATGGTACA GCCCTGCTGA AACCGGTAAT GCCGGCAACC GTATCCCTTT CTCTACAACA
CGGGAGGGAT GGAGTATAGC TGTTGAGATC GATGCCCGAA ATCCTCTTGA AGCAAACAGA
GAGGCGATCC GGCAGCTCAT GAACGGAGCT GAAACCATCA TCTTCACTCT TTCCCCGAAG
GATATTCCTG ATACGGCATT GCTCGATACA CTTCTTGCCG ATATCGATCT TACAGCCGCA
AAGGTTTCTT TCCGCGGCAT TGCCTCACCC GAAAAACTCC TGTCAAGCGC CTCCTCCATT
GCAGACTTCA TTCAGAACAG CGGCGGACTG GAGGACAACA CCACGTATAG CCTGCAACTC
CTCAAACGAT GCGGTGAACT TCCGCAATTC AGAGCCTTTG GTCTCGATAG CGCCAACAGC
AGCATGGGCG AGCTCACCCC CGCCAAGGAG CTGGCAATCA CCCTGACCGG GCTTGAGCGC
CTGCTTCATG ATGCGGCCTC AGAACAAACA ACGCCACGCA CTATCGCAGC CAAAACAGGC
GTCACCCTGA AAGCCGGTCG ATCTTTTTTC CTCAACATTG CAAAGCTGCG TGCCCTTCGA
ATGCTATGGC CCCAGATCCT GGCAGAGCAC GGCGTTGATT CCGACGACCA ATTGGAGCCG
CACGTCACCG TCAGGCTCGA TGCCGCAGCA CCCTACCGTG ACGATGAGCA TAACGCGCTT
ATCATTCTAG CCACCCAGGC GGTCTCGACG ATCATCGGCG GCTGCGATAC AATGATCATC
CCGCCATTGG CCTGCGCATC AGATCACTCA CCCGACATAA CAGGGCATCT CTCAGTCAAT
ATCCACCACA TGCTGCGCCA TGAAAGCATG CTCGGTCATG TTCTGGATCC TGCAGGCGGG
TCGGCCTATA TTGAAACCCT GACAGCAAAG CTGGCTGAAG AGGCCATGAA AATTTACCGC
GAAGCGCTTA CAACGAGAGC TGTCATTCCA TCCAATACCA CCTCCATCGA GTCGTCAGAA
CAAAACGAAA ATCAACCATC GACACTACGC TGCGGACAAC AGGAATGGTT GACACCTGAA
GGCATTGCGA TCAGAAACTG CTATAGAGCC AACGATAGCG ACAACAGTGA ACAACTCGGG
TTCGCCCCGG GATTGCCGCC CTTCAACGCC GGGCCATACT GCTCGATGTA TACCGTCAGG
CCCTGGACCA TCCGACAGTA CGCCGGCTTC TCTACCGCTG AAAAATCAAA CGAATTTTAC
CGCCAGAACC TCGCCGCAGG ACAAAAAGGG CTCTCGGTAG CCTTTGACCT GCCTACCCAT
AGAGGTTATG ATTCCGATCA TCCGAGAGTT GTCGGCGATG TAGGCAAAGC CGGTGTAGCT
ATCGACAGCG TCGAGGACAT GAAAATTCTC TTTGACGGCA TACCGCTTGA CACCATGTCT
GTTTCAATGA CCATGAACGG AGCCGTTCTG CCGATCATGG CGTTCTACAT CGTTGCAGCA
GAAGAACAGG GCGTCCGGCC TGAACAGCTC AGCGGTACTA TTCAGAACGA TATTCTCAAA
GAGTTCATGG TGCGCAACAC CTATATCTAT CCTCCCGCAC CATCGATGAG AATCATTGCA
GACATCTTCG GCTACACGTC GAAGATGATG CCGAAATTCA ACTCGATCAG CATATCGGGC
TACCATATGC AGGAAGCGGG TGCCACAGCT GACCTTGAAC TGGCCTACAC CCTTGCAGAC
GGTCTTGAGT ATATCCGTAC CGGCCTTAAC GCAGGACTTG CCATTGATGA CTTCGCTCCG
CGCCTCTCGT TCTTCTGGGG TATCGGCATG AACTTCTTCA TGGAAATCGC CAAACTCCGT
GCAGCCAGAA TGCTTTGGGC AAAAATCGTC AAGAGGTTCA ATCCGAAAAA CCCTAAATCA
CTCATGCTGC GTTCGCACTG CCAGACATCC GGATGGAGTC TGACGGAGCA GGACCCCTTC
AACAATATCA CCCGAACCTG CATTGAAGCA CTTGCCGCAG TCCAGGGCCA TACCCAGTCG
CTGCACACCA ACGCCCTCGA CGAAGCCATT GCCCTGCCCT CCGTCTTTTC CGCCCGAATC
GCACGCAACA CCCAGCTCTA CCTTCAGGAA GAAACCGACA TCACTCGCGC TATCGACCCC
TGGGGCGGTT CATACTATGT TGAATCACTC ACTACCGAAC TGGCTCTAAA AGCTTGGACA
ATCATTGAAG AGATCGAAAC GATGGGCGGT ATGGTGAAAG CTATCGAACA GGGCTGGCCA
AAAATGCACA TCGAAAAAGC CGCAACCGCC AAGCAAGCAC GTATCGATAC CGGTGAAGAT
ATCATTGTCG GCATTAACCG CTACACCCCG CAAAACCAGA CAGAACTCGA CACTCTCGAG
ATAGATAATA CGGAGGTTCT TCATCAGCAG CTTGCAAAGC TGGAAAAAGT CAAAAAAGAG
CGCGACCAGC AAAAAACCGA TAAAGCCATC GAAGCATTGC GCAACGCCGC AAAAAACGGC
ACAGGCAACC TGCTGGAACT CGCCCTGGAT GCAGCACGCT CAAGAGCAAC GCTCGGAGAA
ATCTCCAGCG CTCTGGAGGA TGCCTTCGGA CGTTACCGAT CCAGCGTCCA GCTCAACGCA
AATGTCTACC TTGCACACAT GCATGACAAC ACAGCATTTA AACAGGCACA GGATCTTGCC
GATACATTCG CCAGGCATGA AGGGCGCAGG CCAAGAATTC TCGTCGCCAA AATCGGTCAG
GACGGCCACG ACCGGGGCGC GAAGGTTATT GCTGCAGGCT TTGCCGATAT CGGGTTCGAT
GTCGATATAA GCCCCCTTTT CCAGACCCCT GAAGAAGTTG TTCGCCAGGC CCTCGACAAC
GACGTTCACA TCATCGGAGT ATCGAGCCTG GCCGGAGGCC ATAAAACCCT GATACCCTCA
GTCGTCAAAG ACCTTGAAAA AGCAGGACGC CGCGATATTG TGGTTATCGC CGGAGGAGTC
ATTCCCCACA AGGATTACGA AGCGCTCTAT AAAGCCGGCA TCGCCAAAGT GTTCGGTCCG
GGAACCATCA TCGCCGAAGC AGCCTGCGAC ATTCTCGAAA CGATGATTGC AGGATTAGAA
GCATAA
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| Protein sequence | MFEEFSPVSK EQWKERLIQE LKGSDYETIV WQTPDGFSQE PWYSPAETGN AGNRIPFSTT
REGWSIAVEI DARNPLEANR EAIRQLMNGA ETIIFTLSPK DIPDTALLDT LLADIDLTAA
KVSFRGIASP EKLLSSASSI ADFIQNSGGL EDNTTYSLQL LKRCGELPQF RAFGLDSANS
SMGELTPAKE LAITLTGLER LLHDAASEQT TPRTIAAKTG VTLKAGRSFF LNIAKLRALR
MLWPQILAEH GVDSDDQLEP HVTVRLDAAA PYRDDEHNAL IILATQAVST IIGGCDTMII
PPLACASDHS PDITGHLSVN IHHMLRHESM LGHVLDPAGG SAYIETLTAK LAEEAMKIYR
EALTTRAVIP SNTTSIESSE QNENQPSTLR CGQQEWLTPE GIAIRNCYRA NDSDNSEQLG
FAPGLPPFNA GPYCSMYTVR PWTIRQYAGF STAEKSNEFY RQNLAAGQKG LSVAFDLPTH
RGYDSDHPRV VGDVGKAGVA IDSVEDMKIL FDGIPLDTMS VSMTMNGAVL PIMAFYIVAA
EEQGVRPEQL SGTIQNDILK EFMVRNTYIY PPAPSMRIIA DIFGYTSKMM PKFNSISISG
YHMQEAGATA DLELAYTLAD GLEYIRTGLN AGLAIDDFAP RLSFFWGIGM NFFMEIAKLR
AARMLWAKIV KRFNPKNPKS LMLRSHCQTS GWSLTEQDPF NNITRTCIEA LAAVQGHTQS
LHTNALDEAI ALPSVFSARI ARNTQLYLQE ETDITRAIDP WGGSYYVESL TTELALKAWT
IIEEIETMGG MVKAIEQGWP KMHIEKAATA KQARIDTGED IIVGINRYTP QNQTELDTLE
IDNTEVLHQQ LAKLEKVKKE RDQQKTDKAI EALRNAAKNG TGNLLELALD AARSRATLGE
ISSALEDAFG RYRSSVQLNA NVYLAHMHDN TAFKQAQDLA DTFARHEGRR PRILVAKIGQ
DGHDRGAKVI AAGFADIGFD VDISPLFQTP EEVVRQALDN DVHIIGVSSL AGGHKTLIPS
VVKDLEKAGR RDIVVIAGGV IPHKDYEALY KAGIAKVFGP GTIIAEAACD ILETMIAGLE
A
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