Gene Paes_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0871 
Symbol 
ID6460639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp949218 
End bp950552 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content51% 
IMG OID642724874 
Productprotein of unknown function DUF107 
Protein accessionYP_002015563 
Protein GI194333703 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.76034e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0484156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTA TCAAAAAAAT AAGCGTTTTT ATTTTCACCG TCTTCGTTCT CTTTTTGTCT 
GTTACAGTAA CGCATAAAGA TGTTCATGGA GATAATGGTC AAAGTGTGCT CTATACTATC
TCTTTGCAGG GGAGTATTAA CCCCGGCAGT GCCGATTTTT TTGATCGGGC AGTTTCGCTT
GCAATAGCCG ATAGTGCACA CGCTGTTCTG GTCGAACTCG ATACTCCGGG AGGATTGGTT
ACCTCTTTGC GACAGATGGT TCGGCGAATC ATGGCTTCAT CGGTACCGGT TATTGTTTAT
GTCGCTCCCC GTGGGGCTCA GGCGGCATCT GCAGGGGCTC TTCTGACCCT TGCCTCCCAT
GTCGCGGCTA TGTCTCCCGG TACCGAGATA GGAGCGGCAC ATCCTGTGGG TCTGGGTGGC
GGAGAGAGCG AGAAGAGCGG TGTGATGAGC CAAAAAGCAG TGAACGATCT TGCAGCATTT
GCCCGAAGTC TTGCCGAAGA GCGGGGCAGA AGCCCGGTTT GGGCTGAAAA GGCGGTAAGG
GAAAGCATAG CTTCAACGGC AAATGAGGCT TTTGAGGCTG GAGTTATCGA TGTTGTTGCC
GATGATCGCA CGACTCTGTT TAAAGCCCTT GAAGGACGTG TCGTTCAGAC TGCTGACCGC
TCAGTTACCT TGTCGCTTGT ATCGGCTGAA CTTCGTGAGC TTTCGCCAAC GTTTCAGGAG
CAGGTGCTGA TGAAGCTTGC TGATCCTAAC CTTGCTTATA TATTTATTAT GGTCGGGCTT
GTAGGACTGT ATTTCGAACT TGCTAACCCG GGCGCAATTT TTCCCGGAGT TGCCGGGGCG
ATTTCGCTGC TGCTTGGTTT GTTCGCGCTT CAGGCCTTAC CGGTCAATAT TGTCGGATTG
CTTCTTCTGG CGCTGTCGGT TATTTTCCTT GGGCTTGAGG TTTTCGTGAC CAGTGGGGGG
GTGCTTGCGA TTTCCGGTCT GATCTCTCTG CTTGTCGGTT CACTGATGCT CTTCAACACG
CCAGAGACCG GTGTTTCCTT GTCTCTTTTT GTTTTTCTGC CGGTTTTTAT AGGTGTTTCT
ATTATAACCC TTACGATCGT CTGGCTGGTT GCCCGTTCAG CGATGGGCGC TCCTCTTTCC
GGTTCAGAAC AGCTTTCCGG TACTGAGGGG AGGGTTGTGC GTGCGATAGG TCCAGGGGTG
ACGGGCAAGG TGTTTGTCCA CGGTGAACTC TGGGACGCTG AAAGCGCTGA ATCGTTACCG
GAAAACGCTC CTGTGACAGT CAGCGGTCTG AAAGGAATGG TTTTGCAGGT AATTTCAAAA
AAGGAGAGTG TCTAA
 
Protein sequence
MFVIKKISVF IFTVFVLFLS VTVTHKDVHG DNGQSVLYTI SLQGSINPGS ADFFDRAVSL 
AIADSAHAVL VELDTPGGLV TSLRQMVRRI MASSVPVIVY VAPRGAQAAS AGALLTLASH
VAAMSPGTEI GAAHPVGLGG GESEKSGVMS QKAVNDLAAF ARSLAEERGR SPVWAEKAVR
ESIASTANEA FEAGVIDVVA DDRTTLFKAL EGRVVQTADR SVTLSLVSAE LRELSPTFQE
QVLMKLADPN LAYIFIMVGL VGLYFELANP GAIFPGVAGA ISLLLGLFAL QALPVNIVGL
LLLALSVIFL GLEVFVTSGG VLAISGLISL LVGSLMLFNT PETGVSLSLF VFLPVFIGVS
IITLTIVWLV ARSAMGAPLS GSEQLSGTEG RVVRAIGPGV TGKVFVHGEL WDAESAESLP
ENAPVTVSGL KGMVLQVISK KESV