Gene Paes_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0833 
Symbol 
ID6460024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp915359 
End bp916849 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content51% 
IMG OID642724835 
Productouter membrane efflux protein 
Protein accessionYP_002015526 
Protein GI194333666 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGGG TGGGTAAAAC AACCGAATTA GGTTATATTT TTTCAGACAG ACCAGCCAAC 
ATATTGTTCA TTGTCGACAT GCATATCATC AGAGCATACC TTTTTACCCT TACTTTCGCA
GCAGCTTTCA GCCTGTTGTT GCCCGGCCGG GCTTTTACTT CAGGCGTTCC TTCATCTGTT
GGGCTTGTTG TCTCACTCGA TGAAGCGGTT TCTATCGGTC TGGAGAAGAA CCGGAGCCTG
GAAATCGCGC GCCTTGACCG TGATCTTGCC GGAGCTAAAG TACGCGAGGC ATGGTCCGGT
GTTCTTCCTC AGATCAGCAC AGGTTTTGAG TATACCCGTT CGATACAGCC TTCGGTTATT
TTTCTTCCGG ACCTGGAAAG TATCTTCTCA GGAACCACGC CAGGGAGCCC GACAGCTTTG
GAAATCAGTC AGGACAATGC CATGAGCGCT TCGTTGTCGA TCACGCAGAA GCTGTTCGAC
GGCCGTGCTA TTGCCGGTAT CAAGGCCTCT TCGATTGTCA GGCAAATCAG TCAGGAAGCG
TTGCGGGAGG CTAAAGCAGA TATTATAAGC CGGATCAGGA AAGCCTACTA TAACGTTCTG
ATTTCGGACG AACAGGTTAC GATCCTTAAG CAGAGTGAGC TTCGATGGGA GAAAGCCCTT
CAGGACAGCC GGGCTCTTTT TTCTCAGGGG GTGGCTGCCG ATATCGATAC GCTCAAAGCA
TTTCTTTCAG TTCAGAATAT CCGGCCGGAC CTTATTCAGG CTGAAAATCG TGCAGCTGTT
GCTCGTACGG AATTCAAAAA CATTATCGGA ATCGATCCCC TGAGACCGGT TGTGCTTTCC
GACTCTCTGG TCTATCAGCC CCTTGAGCAG CCGGGTGATA TTGCTTCGGC CTATGCCGAA
GCTCTTGATT CGAGGCCCGA TGTGCGACAG CTTGAGCTGC AGGTCGAGGC TGAGGGAGAG
AACGTCAGTG CTGCAAGGGC TGAAGGTTAT CCTGCAGTAA CTGCAGTAGG GCAGTTGCAG
ACCCAAACGC AGTATGACGA TGGAATAAAG CTCGGCGATA CCGATTGGCC GGTATCGTCA
TCGGTCGGGG TGGAAGTTTC TATGCCTCTC TTTACCGGTT TCGGCATCAA GTCCCGCGTT
GAGCAGGCTA AAATTGGGCG GATGCAGACC CTGACAAGGT TAGATGACCT GAAGGCCAAT
ATTCGCGCTG AAGTGCAAAC CAGACTTTCA CGGCTCGATG AGTCCCGTTC GAGAATCGAG
GTTCAGGAAA AAACCATACA AACCGCTGAA AGGAGTTATG CAATTACTCG CCTTCGTTAT
CGTGAAGGTG TTGGTTCACA GCTTGAACTT GCCGATGCCG AGCTGCAGCT CAACAAAGCT
AAAACCAACT ATCTGCAGGC AGTGTATGAT TACCTCATAG CCCGTATTGA CTACGACAAG
GCTCTCGGAA GAACTGCAAG ACTGGCTGAT GAGCCACAAG GCAGCTCCTG A
 
Protein sequence
MLRVGKTTEL GYIFSDRPAN ILFIVDMHII RAYLFTLTFA AAFSLLLPGR AFTSGVPSSV 
GLVVSLDEAV SIGLEKNRSL EIARLDRDLA GAKVREAWSG VLPQISTGFE YTRSIQPSVI
FLPDLESIFS GTTPGSPTAL EISQDNAMSA SLSITQKLFD GRAIAGIKAS SIVRQISQEA
LREAKADIIS RIRKAYYNVL ISDEQVTILK QSELRWEKAL QDSRALFSQG VAADIDTLKA
FLSVQNIRPD LIQAENRAAV ARTEFKNIIG IDPLRPVVLS DSLVYQPLEQ PGDIASAYAE
ALDSRPDVRQ LELQVEAEGE NVSAARAEGY PAVTAVGQLQ TQTQYDDGIK LGDTDWPVSS
SVGVEVSMPL FTGFGIKSRV EQAKIGRMQT LTRLDDLKAN IRAEVQTRLS RLDESRSRIE
VQEKTIQTAE RSYAITRLRY REGVGSQLEL ADAELQLNKA KTNYLQAVYD YLIARIDYDK
ALGRTARLAD EPQGSS