| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0828 |
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| Symbol | |
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| ID | 6460479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 910904 |
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| End bp | 912025 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642724830 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002015521 |
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| Protein GI | 194333661 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACACG CATCGCATAG TACTGCCAGG GATGAATATT ATATGCATCG ATGTCTTGAA
CTGGCTCGTA AGGGTGCCGG TTTGGTCAGC CCGAATCCGA TGGTCGGGTC AGTGATCGTT
GTTGAGGACA GGGTTGTCGG GGAGGGTTTT CACGAGCGTT ACGGAGGCCC TCATGCAGAA
GTCAATGCAC TTGCTTCTGT TTCCGATGCT TCGCTTTTGC CATCATCCAC ACTCTATGTG
AATCTTGAGC CATGCTCTCA TTACGGCAAG ACTCCGCCCT GCAGTGACCT CATTATCAGC
AAAAAGATCA GGCGTGTGGT TGTCGGTTGC CTCGATCCGC ATGAAAAAGT TGCTGGAAAA
GGGATTGAAA AACTGCGTCA GGCTGGTGTT GAGGTGACGA TCGGAGTGCT GCAGCGCGAA
TCGGAAGCAC TGAACGAAGC GTTTATCAAA AGCCATACCA TCTCGATGCC GTTTGTTGTC
CTGAAAACAG CGCAGACGAT TGATGGGCGA ATTGCTGTTG CTTCGGGAGA ATCGAAATGG
GTTACCGGTG CTGAATCCCG CAGGGAGGTG CACCGGATGC GCTCTGTGCA TGATGCTGTC
ATGACGACGT CGTCAACCGT GATCGCTGAT AATTCACGGC TGACGGTCCG CCATTGTGAG
GGGCGAAATC CTGTCAGGGT GGTTTTGGAT CGCTTGCTTC GTGTTCCCCT GTCGAGCGCC
ATTTTTGATG GAGAAGCTAA AACCATTCTC TATACATCGA ACGCTCTCGG CAGTTCAGAA
AAGGCCCGGG CGCTGAAGGC AATGGGGGTG ATTGTTTGTG CCGCGGGTGA TGATGGGGAC
TTTCTCGACC TTTCTGCAGT GCTGAAAAGC CTTCATGATG AGCATGCGCT GTTATCCATT
ATGGTCGAGG CGGGCGGGAC GCTTGCCGGA GCGCTTATCC GTCACCGTCT TGTCGATAGG
ATTGTCTGGT TTGTCGCACC AAAACTTTTT GGCGCCGATG GTCTGGGCGC TGTTGGATCT
CTTGGACTTC AGTCTGTCGA TGATGCTCCG GTCATGAGGT TTTCCTCATC CCGGTTTTTA
GGCAATGATC TCTGTATCGA ATCATCCGTT TTCTTTGAGT GA
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| Protein sequence | MGHASHSTAR DEYYMHRCLE LARKGAGLVS PNPMVGSVIV VEDRVVGEGF HERYGGPHAE
VNALASVSDA SLLPSSTLYV NLEPCSHYGK TPPCSDLIIS KKIRRVVVGC LDPHEKVAGK
GIEKLRQAGV EVTIGVLQRE SEALNEAFIK SHTISMPFVV LKTAQTIDGR IAVASGESKW
VTGAESRREV HRMRSVHDAV MTTSSTVIAD NSRLTVRHCE GRNPVRVVLD RLLRVPLSSA
IFDGEAKTIL YTSNALGSSE KARALKAMGV IVCAAGDDGD FLDLSAVLKS LHDEHALLSI
MVEAGGTLAG ALIRHRLVDR IVWFVAPKLF GADGLGAVGS LGLQSVDDAP VMRFSSSRFL
GNDLCIESSV FFE
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