Gene Paes_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0797 
Symbol 
ID6460218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp875278 
End bp876084 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content48% 
IMG OID642724793 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002015490 
Protein GI194333630 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA ACACCCAGCA AATTCTTGAC CTTATCGTCA CCTATGGCCT GAAAATCGTT 
ACCGGCCTGA TTATCCTCTT CATCGGCATA AAGATTGCCG GTTTTACCGA CAGGAAAATC
GAAAACCTGC TTCACAAAAA AGCCGATATC GACGAAATGC TGGTGAAGTT TCTCTCCAAC
CTTGTACGAT ACACCATCAT CGCCTTCTCT GTCGCCGCAT TTCTGAACCA GGTAGGCATT
CAGACCGCCA GTATCATTGC CGTGCTCGGA ACCGCCGGAC TTGCTGTAGG ACTTGCCATA
CAGGGAACGC TCTCCAATAT CGCCGCAGGT GTTATGCTGC TCATCTTCCG TCCCTTCAGA
ACAGGAAACT ACGTTGAGGT TGGCGGACAC GGGGGCACGG TCAAAGCCTT AAGTCTCTTC
ACGACCGAAC TTGCTACTCC CGATAACGTT CAGATTATCA TTCCAAACAA TTCGGTATGG
GGCAACTCCA TTGTCAATTA TTCTTTCCAC GACACACGCA GAGTTGATTT CATCCTCTCA
ATATCCTATA GCGACAATAT CAGCACCGGC ATCGATACCA TTCGACGTGT GATAGACGGG
GAGACAAGAA TACAAAAAAC GCCTGAACCT CAGATTGTCG TCAGTGAACT TGCAGCCAGT
TCTGTAGACA TCACGGTAAG AGCCTGGGTA GAAAAGGATA ATTACTGGCC CGTTAAATTT
GACCTCACCA GACAGTTCAA GGAAAATCTG GAAGCTGCCG GACTCCATAT TCCCTTCCCG
CAGCAAGACA TTCACCTTAT CCGCTAA
 
Protein sequence
MNINTQQILD LIVTYGLKIV TGLIILFIGI KIAGFTDRKI ENLLHKKADI DEMLVKFLSN 
LVRYTIIAFS VAAFLNQVGI QTASIIAVLG TAGLAVGLAI QGTLSNIAAG VMLLIFRPFR
TGNYVEVGGH GGTVKALSLF TTELATPDNV QIIIPNNSVW GNSIVNYSFH DTRRVDFILS
ISYSDNISTG IDTIRRVIDG ETRIQKTPEP QIVVSELAAS SVDITVRAWV EKDNYWPVKF
DLTRQFKENL EAAGLHIPFP QQDIHLIR