Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0797 |
Symbol | |
ID | 6460218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 875278 |
End bp | 876084 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642724793 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002015490 |
Protein GI | 194333630 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA ACACCCAGCA AATTCTTGAC CTTATCGTCA CCTATGGCCT GAAAATCGTT ACCGGCCTGA TTATCCTCTT CATCGGCATA AAGATTGCCG GTTTTACCGA CAGGAAAATC GAAAACCTGC TTCACAAAAA AGCCGATATC GACGAAATGC TGGTGAAGTT TCTCTCCAAC CTTGTACGAT ACACCATCAT CGCCTTCTCT GTCGCCGCAT TTCTGAACCA GGTAGGCATT CAGACCGCCA GTATCATTGC CGTGCTCGGA ACCGCCGGAC TTGCTGTAGG ACTTGCCATA CAGGGAACGC TCTCCAATAT CGCCGCAGGT GTTATGCTGC TCATCTTCCG TCCCTTCAGA ACAGGAAACT ACGTTGAGGT TGGCGGACAC GGGGGCACGG TCAAAGCCTT AAGTCTCTTC ACGACCGAAC TTGCTACTCC CGATAACGTT CAGATTATCA TTCCAAACAA TTCGGTATGG GGCAACTCCA TTGTCAATTA TTCTTTCCAC GACACACGCA GAGTTGATTT CATCCTCTCA ATATCCTATA GCGACAATAT CAGCACCGGC ATCGATACCA TTCGACGTGT GATAGACGGG GAGACAAGAA TACAAAAAAC GCCTGAACCT CAGATTGTCG TCAGTGAACT TGCAGCCAGT TCTGTAGACA TCACGGTAAG AGCCTGGGTA GAAAAGGATA ATTACTGGCC CGTTAAATTT GACCTCACCA GACAGTTCAA GGAAAATCTG GAAGCTGCCG GACTCCATAT TCCCTTCCCG CAGCAAGACA TTCACCTTAT CCGCTAA
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Protein sequence | MNINTQQILD LIVTYGLKIV TGLIILFIGI KIAGFTDRKI ENLLHKKADI DEMLVKFLSN LVRYTIIAFS VAAFLNQVGI QTASIIAVLG TAGLAVGLAI QGTLSNIAAG VMLLIFRPFR TGNYVEVGGH GGTVKALSLF TTELATPDNV QIIIPNNSVW GNSIVNYSFH DTRRVDFILS ISYSDNISTG IDTIRRVIDG ETRIQKTPEP QIVVSELAAS SVDITVRAWV EKDNYWPVKF DLTRQFKENL EAAGLHIPFP QQDIHLIR
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