| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0786 |
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| Symbol | |
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| ID | 6458847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 862048 |
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| End bp | 863466 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724782 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002015479 |
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| Protein GI | 194333619 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.378265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC CAAGAACGAA GAAGGGGTTT GACCGTCTGG GCAACGTGAT CAACAAAAGC
GGCGCCAGGG GCAGAGGGTT TATCGACAGG GTGTTCAGCC GATGGATTCC TATGGATGAA
GAGGAGCCTC TTGACTGGGT CGGCGACGCA GACTGGGCCC GGATTCAGCA GGAGCCTGTC
AGAGCCCGTG CACTGCTCAA AATGTTTGGT ATTACGATAG CGCTGCTTTT GATATGGGCA
GCGATCGCTC CGCTTGACGA GGTGACCAGG GGTGCCGGCA AAGTGATCCC TTCATCGCGT
CTGCAGGTTA TCGAATCTCT TGACGGCGGC GTGGTTGAAG AAATTGTCGT CCATGAGGGG
GATATCGTCA AGGCCGGCGA TCTTCTCATG AGGATCGACC CTACGCGCTA TACCTCATCT
TTGCAGGAGA AACAGTACGA GGTACTCAGT CTTATTGCAC GAGCAGCACG TTTGCGTGCT
CTTGCCGAAG ATACGCCTCT TGAACTGCCG GAAGAGGAGC TGAAAGCTGT CCCTCAGATC
GTGACGCATG AGAAACATCT CTATGAGGAG AGCCGGCGCG AGTTTGAGTC GCAGATGACT
ATTATGAGAG AACAGCTTTC CCAGAAAGAA CATGAACTCG AAGAGGTACA GGCCAGACGG
ATTCAGTCTC AGCAGGCCTA TGGTCTCGCT GCTCAGGAGT TAAACAAAAC GGCCCCGCTT
TTGGCTTCTG GAGCGGTTTC CGAGGTTGAG GTTATACGAC TGAAGCGTGA TGTGGCCAAT
GCAAGAGGAG AGCGTGATGC TGCCCTGGCC AGAAAAGCGA CTCTGGAGCG TTCCGTTGAG
GAGGCTCGCG AGAAGGTCCA TGAGACGGAA CTGAACAGCC GCAATAAATG GCGTAATGAG
CTTGCCGATG TGTTGAGTAA GATCGCCAGC ATGAGTCAGG GGACCAAGGG TCTTGCTGAC
AGGGTGTTGC GCGCAGAGAT TATCTCACCG GTAAACGGAA CCGTGCAGCG TCTCTATATC
AATACGCTCG GTGGAGTTGT GCAGCCGGCG GGACGCGTTG CCGATGTTGT TCCTCTCGGG
GACAGTCTCG AGGTGGAGGT CAAGGTGTCG CCAAAAGATA TCGCATTTGT TTTCCCCGGC
CAGAAAGCGC TCGTGAAGCT GACTGCGTAC GAGTTTTCGA TTTATGGAGG GCTTGAGGCT
GATGTTTACA ATATCAGTCC TGATACAGTG ACCGACGAAC AGGGCAATAC CTTTTATCTT
GTCCGGGTCA AAACGCACAA GTCGTCAATT GGAAAAGGAT TTCCGATTAT TCCGGGTATG
ATGGCTCAGG TGGATATTCT GACAGGGAAA CGCACGGTGC TGATGTATCT GCTGAAGCCT
ATTCTGAGAG GAACCTCGAA TGCAATGAAG GAGAGGTAG
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| Protein sequence | MIDPRTKKGF DRLGNVINKS GARGRGFIDR VFSRWIPMDE EEPLDWVGDA DWARIQQEPV
RARALLKMFG ITIALLLIWA AIAPLDEVTR GAGKVIPSSR LQVIESLDGG VVEEIVVHEG
DIVKAGDLLM RIDPTRYTSS LQEKQYEVLS LIARAARLRA LAEDTPLELP EEELKAVPQI
VTHEKHLYEE SRREFESQMT IMREQLSQKE HELEEVQARR IQSQQAYGLA AQELNKTAPL
LASGAVSEVE VIRLKRDVAN ARGERDAALA RKATLERSVE EAREKVHETE LNSRNKWRNE
LADVLSKIAS MSQGTKGLAD RVLRAEIISP VNGTVQRLYI NTLGGVVQPA GRVADVVPLG
DSLEVEVKVS PKDIAFVFPG QKALVKLTAY EFSIYGGLEA DVYNISPDTV TDEQGNTFYL
VRVKTHKSSI GKGFPIIPGM MAQVDILTGK RTVLMYLLKP ILRGTSNAMK ER
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