| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0740 |
|---|
| Symbol | |
|---|
| ID | 6459804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 790565 |
|---|
| End bp | 791626 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642724737 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_002015434 |
|---|
| Protein GI | 194333574 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA TTGTCTCTAT ACCCGGTGAC GGGATTGGAC CGGAAGTGGT GGCAAGTGCC
ATCCGGGTCA TCAATACGCT TGCCCGACAG CATGGCCTTG AAATTACAAT CGAGGAGCAC
CTTTTCGGAG GTGCCTCCTA TGATGTTCAC GGTGAGATGC TGACCCAGGA AACCCTCGAA
GCCTGCCGCA AATGCGATGC GGTTCTCCTT GGTGCGGTCG GTGGACCGAA ATGGGAAAAT
CTGCCTCATG AGAAAAAACC CGAAGCGGCC CTCCTCGGGA TCCGCAAGGA ACTCGGTCTG
TTTGCCAATT TCAGACCAGC CAAAGTCTAC GATGCGCTGG TCAATGCGTC ATCACTCAAA
CCTGAGATTC TTGCAGGCAC CGATTTCATG GTCATCAGAG AACTGACCGG CGGAATCTAC
TTCGGAGAGC CAAGAGGTTA TGACGACACC AGAGGCTGGA ATACGATGGT CTATGAGCAC
TATGAAGTCG AGCGCATTGC CCGTCTTGCC TTTGATGCAG CCATGAAACG CAAGAAACAA
CTTGTCTCAA TAGATAAAGC CAACGTTCTC GAAAGCTCTC AGTTCTGGAG AAATATTGTT
CATGAAGTCC ATAAGGACTT TCCTGAGGTC GAACTCATCG ACATGTATGT CGACAACGCG
GCCATGCAGA TAGTACGCGA TCCCAAACAG TTTGACGTTA TCGTCACAAA AAACCTGTTT
GGCGACATTC TCAGCGATAT CTCCGGCATG ATCACCGGAA GCCTCGGCAT GCTTCCTTCG
GCAAGTATCG GCTCAAGCCA TGCGCTCTAT GAGCCTATTC ACGGCAGCGC CCCGGACATC
GCAGGGCAGA ACAAAGCCAA CCCGATAGCT ACGATCGCAT CGGCGGCCAT GATGTTCGAA
CACAGCTTCT GTATGAAAAA TGTCGCAGAT GAAATATACA GCGCCATTGA AAAAACACTG
GCTTCGGGAT TCAGAACCGC CGATATCGCT AATCCGGAAG ACACTATCGT TTCAACAACA
GAGATGACCG ATGCTATCGT AGCAAATCTT GAGGCATCAT AA
|
|---|
| Protein sequence | MFKIVSIPGD GIGPEVVASA IRVINTLARQ HGLEITIEEH LFGGASYDVH GEMLTQETLE
ACRKCDAVLL GAVGGPKWEN LPHEKKPEAA LLGIRKELGL FANFRPAKVY DALVNASSLK
PEILAGTDFM VIRELTGGIY FGEPRGYDDT RGWNTMVYEH YEVERIARLA FDAAMKRKKQ
LVSIDKANVL ESSQFWRNIV HEVHKDFPEV ELIDMYVDNA AMQIVRDPKQ FDVIVTKNLF
GDILSDISGM ITGSLGMLPS ASIGSSHALY EPIHGSAPDI AGQNKANPIA TIASAAMMFE
HSFCMKNVAD EIYSAIEKTL ASGFRTADIA NPEDTIVSTT EMTDAIVANL EAS
|
|---|
| |