Gene Paes_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0722 
Symbol 
ID6460754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp769972 
End bp771795 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content50% 
IMG OID642724719 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002015416 
Protein GI194333556 
COG category[L] Replication, recombination and repair
[K] Transcription
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.017054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.720031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCT CTCCGGGATT TCCGCCTCCC TTGTTTTTTT TCCATTTTAC AGAGATTATG 
ATGACAATGA TGACGAAACA AGATGTTCCT GACAGTTTCA GGGATCTGGA GCTTGCCGCG
CCAGTTATTG AAGCACTTGA CAAGGTTGGG TATGAAAATC CCACACCGAT TCAGCTTCAG
ACTATTCCCT ATATCCTTCA GGGTCGCGAT GTCCTTGGTC AGGCTCAGAC CGGTACCGGA
AAGACAGCAG CTTTTGCCCT GCCGATTCTT TCACGAATAG ATTGTGATAA AAACTATCCT
CAGGCACTCG TTCTGACTCC GACAAGAGAA CTTGCGATTC AGGTTGCCGA GGCCTTTCAG
CGATATGCTG CCTGTATGCC TGATTTTCAT GTGCTGCCGA TATACGGAGG TCAGGATTAC
GCCGGCCAGC TTAAACGCCT CAAGAGGGGT GTTCATGTGG TTGTCGGTAC CCCTGGACGT
GTGATTGATC ATATCAAGCG CTCCTCTCTG AAGCTTGACA AGCTTCATAC TCTTGTGCTT
GACGAGGCAG ACGAAATGCT CAGAATGGGA TTTGTCGATG ATGTCGAGTG GATTCTCGAA
CAGACTCCCG CTTCCCGTCA GGTTGCGCTT TTTTCGGCAA CCATGCCGTC GGTGATACTG
AGGATTGCAC GCAAACACCT CAGTGATCCG GCTGAGATCA CGATCAAGTC AAAGAGTTCG
ACAGTCGATG CGATTACCCA GCGTTTTCTG ACGGTTGGTG CCCACCACAA GCTTGAAGCA
CTGACAAGGA TTCTCGAAGC AGAGCCATTT GACGGTGTGA TCATTTTTGT CAGGACACGA
ACCGCAACCC AGGATCTTTC TGAAAAACTC CGGGCAAGGG GATACGCTGC GGCCGCATTG
AGCGGCGAGA TGGTGCAGCA CCAGCGCGAG AAGACCATTG ACCAGCTTAA AAACGGAAAG
CTGAACATTA TTGTTGCGAC TGATGTGGCA GCAAGAGGTC TTGATGTGGA GCGTGTTACC
CATGTTATCA ATTATGACAT TCCTTCTGAT ACCGAATCCT ATGTTCACCG TATCGGGCGT
ACCGGACGTG CGGGCAGGAG TGGTGATGCA ATTCTGTTTG TGACATCACG AGAAATGTCC
ATGTTGAGAA CCATCGAGAG GGCCGTTCGT CGTTCAATCG ACCGTATGGA GCTGCCTTCG
GCGGAGATGA TAAACGATAA GCGGATTGCC AAATTCAAGC AGCAGATCAG CGATGTCATT
TCCACTGAGG ATCTTGAAGT CTTCAGTGAT CTTGTCGAGC AGTATTGCCG CGATCATGAT
TCTACCATGC TTCAGGCTGC TGCGGCGCTT GCATTTATGG TTCAGGGCAC GACCCCGCTT
CTGGTCTCTG CGGAACCATT ACATGACACC TCCCGTTCAC AGTCTCAGGG ACGACAGAAG
AGGACCGACA GGCGATCGTC ATCACGAGGT GACTCTTTGC CGTTTTCACA GCAGGACGGT
ACAGAAACAT TTCGTATCGA AGTCGGTAAG GTTCATGGAG TCAAACCTGG CAATATTGCC
GGAGCTATTA TCAATGAAAC AGGACTGCCT GCAGATTCGG TCGGAAGAAT TTCCATTCAG
GAGGAGTACA GTACCGTTGA CCTTCCGCAG GGAATGCCTA AAGACCTGTT CAGAGAGTTG
AAGCGTGTCT GGGTTTGTGG ACAACAGCTT CAGATTTCTC ATTTTGAGGG TTCTTCGTCA
GGATTCCGTT CCTCATCGTC GAACTTCAAA AAAGCAAAAA GATCGGTTGC CAGAACATCT
CGTTCCAAGA GAAAGGGGCG TTGA
 
Protein sequence
MFSSPGFPPP LFFFHFTEIM MTMMTKQDVP DSFRDLELAA PVIEALDKVG YENPTPIQLQ 
TIPYILQGRD VLGQAQTGTG KTAAFALPIL SRIDCDKNYP QALVLTPTRE LAIQVAEAFQ
RYAACMPDFH VLPIYGGQDY AGQLKRLKRG VHVVVGTPGR VIDHIKRSSL KLDKLHTLVL
DEADEMLRMG FVDDVEWILE QTPASRQVAL FSATMPSVIL RIARKHLSDP AEITIKSKSS
TVDAITQRFL TVGAHHKLEA LTRILEAEPF DGVIIFVRTR TATQDLSEKL RARGYAAAAL
SGEMVQHQRE KTIDQLKNGK LNIIVATDVA ARGLDVERVT HVINYDIPSD TESYVHRIGR
TGRAGRSGDA ILFVTSREMS MLRTIERAVR RSIDRMELPS AEMINDKRIA KFKQQISDVI
STEDLEVFSD LVEQYCRDHD STMLQAAAAL AFMVQGTTPL LVSAEPLHDT SRSQSQGRQK
RTDRRSSSRG DSLPFSQQDG TETFRIEVGK VHGVKPGNIA GAIINETGLP ADSVGRISIQ
EEYSTVDLPQ GMPKDLFREL KRVWVCGQQL QISHFEGSSS GFRSSSSNFK KAKRSVARTS
RSKRKGR