Gene Paes_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0704 
Symbol 
ID6460359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp750672 
End bp751280 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID642724701 
ProductSNARE associated Golgi protein 
Protein accessionYP_002015398 
Protein GI194333538 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.693025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TTTCCTCTCT TCAGCATGTT CAAACCCTCG ACGAACTCAT TCTCTGGGGA 
GGATACGCGC TTCTTTTTGC CATTGTTTTT GCAGAAACAG GTCTCTTCGC CGGTTTTTTT
CTGCCGGGCG ACTCACTGCT TATCACTGCA GGCCTGATTG CTGCGTCAGG CAAACTCGAC
ATCTCGCTGG TCATAGCCAC CCTCTGCTGT GGAGCTATCC TTGGAGACTC GACAGGCTAC
TTTATCGGTA CGCGGCTTCA ACGAGCATTT TTCAAAAAAA ATGAAACGCT TTTTTTCAGA
AAGGAACACG TGGAAAAAAC AGAACGATTT TACGAAAAGC ATGGTTCCAA GGCAGTTTTT
CTTGCACGCT TCGTTCCTGT TGTCAGAAGC TTCACAACAA CCCTTGCCGG TGTTGCCGCT
ATGCCCTATC CTGTTTTTCT TTTCTACAGC GTTACCGGGG CATCGACCTG GGTACTCTGT
TTTACCCTGA TAGGCTATTT TCTTGCGACA ATCTTTCCTG ACCTTGTTGA TTATGTTCAC
TATATTATTC TGGCTGGTAT CGTTATCATT CTCATAAGCG CATTACGGCA CCTCAGCAAA
AAAACCTGA
 
Protein sequence
MSIFSSLQHV QTLDELILWG GYALLFAIVF AETGLFAGFF LPGDSLLITA GLIAASGKLD 
ISLVIATLCC GAILGDSTGY FIGTRLQRAF FKKNETLFFR KEHVEKTERF YEKHGSKAVF
LARFVPVVRS FTTTLAGVAA MPYPVFLFYS VTGASTWVLC FTLIGYFLAT IFPDLVDYVH
YIILAGIVII LISALRHLSK KT