| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0677 |
|---|
| Symbol | |
|---|
| ID | 6459798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 720642 |
|---|
| End bp | 723512 |
|---|
| Gene Length | 2871 bp |
|---|
| Protein Length | 956 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724670 |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_002015371 |
|---|
| Protein GI | 194333511 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0725474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGGG ACGGTCAACA AGACGGTAAT CGCGATCAGG ACCTGCTGCC GGATATCGTA
CTCAAAGGGG TAAGAACTCA CAATCTCAAA GGGATTTCCG TCAGGATTCC CCGCAATAAG
TTTGTCGTTC TGACCGGGGT CAGCGGTTCA GGTAAATCCA GTCTTGCTTT CGATACCCTA
TACGCTGAGG GACACAGAAG GTATGTCGAG TCCATGTCCT CCTATATCCG GCAGTTTCTC
GAGAGGATGG CTAAGCCCGA TATTGACACT ATTGAAGGGA TAGCTCCTGC TATAGCAATT
GAACAGAAAC CCCTGCCGAA AAATCCCCGT TCGACCGTCG GGACCGTTTC CGAGATTTAT
GACTACCTCC GGTTGCTCTA TGCCAGAATT GGTAAAATCT ACTCTTCGGA TACTGATGAA
CTTGTTCTGA AGCATACTCC TGAAGATGTA AGCATTCAGG CCGGTTTTCT TGAAGAAGGC
ACGCGGTTCA TGGTAGGTTT TCCTTTCTCT TTACATAAAG ACAGTCGGGC CCATTCCTGT
TCGGTTGATG AAGAGCTGAA CAATCTTCTC CAGAAGGGAT TTTTCAGGCT TGTCGCCGGC
GATGAACTTC TTGATCTCAA CAACAAGAGC CAGCGATCGC TTGTTTCGAC TATGAAGCCA
GAGGCTCTGC AGGACCTCAT GGTTCTTGTC GATCGTTTCA AACTTACTCA CGATGACAAG
ACCTTCAGCC GCGTCGTTCA GGCGGCCGAG ACCTGCTTCA ATGAGTCGGG AGGATATGCC
TGGTTAAAAA TTTCTTCCGG AAAGCTCTAC CGTTTCAGTG AAAAACTTGA GCTTAATGGC
GTTGAATATC AGGAGCCGTC CCCTCAGCTT TTCGCGTTTA ACTCTCCTCT CGGAGCCTGT
CCGACATGTC AGGGTTTCGG CCGTATTGCC GGTATAGATG AAGATGCCGT GATTCCGAAC
AAGTCGCTCA GCATTGCCGA CGGAGCTATT GCGTGCTGGA CTTCGGAAAA GTACAGCCGT
CATTGGAAAC GTCTGCTTGA GATAGCTCCC CGGTCAGGCA TATCGATCGA TCAGCCCTAT
GAGAAGCTTC CTCAAAACCA GAAGGATAAG ATCTGGAAAG GTATTCGGGA TAAAGGCTAT
AAGGGGATAT GGCCATTTTT TTCCGAAATT GAAAAAGATG CAGGCTACAA GGTTCACTTC
AGAGTATTTC TGAGTCGTTA TCGGGGGTAT GCAATTTGTC CTGACTGTGA AGGGAGCCGG
CTCAAGCCGG AGGCGAGATA TATTAAGGTA TCAGGTCGTC ATATCGGCGA GGTGACCCGA
ATGAATATCG CTGGAGCGTA TGACTTTTTC GACGGGCTCG ATATTTCCCC GTTTGATCGG
AAGGTCGCCG GTGCAGTGCT GCAGGAGATT CAGAAGCGTC TGAAATATAT GCTCGATGTC
GGCCTGGATT ATCTGACGCT GGATCGTCTG ACGCACACTC TGAGCGGCGG TGAATTTCAG
AGAATCAACC TCTCAACATC GCTTGGCTCG CCTCTGGTGG GTGCGATGTA TATTCTCGAT
GAACCGAGTA TCGGTCTTCA TCAGAGCGAT TCGACGAGGC TTATCGATTT GCTCAAGAGA
CTGAGAGACC TTGGCAATAC TGTCGTTGTT GTTGAGCATG ACCGGGAGAT CATCGAAGCC
GCAGATGAAC TGATCGATCT TGGGCCTTAT GCCGGAAGAC TTGGAGGGGA AGTGGTCTAT
CATGGCTCCC CGGCAGATAT GATCACGGCT TCAACATCCC TGACTGCCGA CTATCTGACA
GGCAGAAAGG TGATCGAGGT CCCTGAGACA CGCAGAGAAG TGGATTTCTC CAGATCTATC
GAGGTGACCG GTGCCATGCA GAACAACCTG AAAAACATCG ATGTGCGTAT TCCTCTCGGT
GTTCTCACCT GTGTTACCGG TGTCAGCGGA TCAGGAAAGT CGACGCTTGT CAATGATATT
ATTTTCAAAG GCATCCGGCG CGCCAAGGAG CTTTCCGCCG AAAAGGTTGG TACGCATTGC
GCCCTTACCG GGCATGAATA TATTCACAGT GTCGAGCATG TCGATCAGTC TCCGATCGGC
AAATCAAGCA GAAGTAATCC TGTGACCTAT CTGAAAATCT TCGATGACAT CCGTCAGCTA
TTCTCTCAAA CGCGACTGGC TTTGGCCAAG GGGTGGAAGC CAGGCTATTT TTCATTCAAT
ATTCCCGGTG GCAGGTGCGA AACCTGTGCA GGTGAAGGGA CGCTGCGTAT TGAAATGCAG
TTTCTTGCCG ATATCGAGGC TGTCTGTGAT GAGTGCAACG GAAAGCGCTA TAAAGCTGAT
ACTCTTGAGG TTACCCTGAA CGGTCTTTCC ATAGCAGACG TGCTGGATTT GACGGTCAGT
GATGCGATGG ATTTTTTTGC CGGAGAAAAA TCGATTCTGA GGAAACTCAG GGTTCTCGAT
GAGGTGGGGC TTGGTTATAT TCGGCTCGGT CAGTCATCCA GTACGCTTTC GGGCGGAGAA
GCCCAGCGTC TTAAACTGGC AAGCTTTATT GTTCGGGCCG ATATTGAACA TACGCTCTTT
ATCTTTGACG AACCTACGAC AGGGCTTCAC TTCGACGACA TCCGTAAACT GATCGCCTGT
TTTGATCGTC TGCTTCTTCA GAATAACACT CTGCTTGTCA TCGAGCATAA TCCCGATATC
ATAAAACAGG CCGACTGGGT TATCGATCTT GGTCCCGGGG CTGGTGATAA AGGGGGGGAG
ATTGTCGCGG TCGGCTCGCC TGAAGCCATC TGTCGTAACA GTAGTTCAAT CACCGGACAC
CATCTGGCTC CATGGCTTGA TAGTACTCAA CAGAATGAGA TCAGAGATTA A
|
|---|
| Protein sequence | MIRDGQQDGN RDQDLLPDIV LKGVRTHNLK GISVRIPRNK FVVLTGVSGS GKSSLAFDTL
YAEGHRRYVE SMSSYIRQFL ERMAKPDIDT IEGIAPAIAI EQKPLPKNPR STVGTVSEIY
DYLRLLYARI GKIYSSDTDE LVLKHTPEDV SIQAGFLEEG TRFMVGFPFS LHKDSRAHSC
SVDEELNNLL QKGFFRLVAG DELLDLNNKS QRSLVSTMKP EALQDLMVLV DRFKLTHDDK
TFSRVVQAAE TCFNESGGYA WLKISSGKLY RFSEKLELNG VEYQEPSPQL FAFNSPLGAC
PTCQGFGRIA GIDEDAVIPN KSLSIADGAI ACWTSEKYSR HWKRLLEIAP RSGISIDQPY
EKLPQNQKDK IWKGIRDKGY KGIWPFFSEI EKDAGYKVHF RVFLSRYRGY AICPDCEGSR
LKPEARYIKV SGRHIGEVTR MNIAGAYDFF DGLDISPFDR KVAGAVLQEI QKRLKYMLDV
GLDYLTLDRL THTLSGGEFQ RINLSTSLGS PLVGAMYILD EPSIGLHQSD STRLIDLLKR
LRDLGNTVVV VEHDREIIEA ADELIDLGPY AGRLGGEVVY HGSPADMITA STSLTADYLT
GRKVIEVPET RREVDFSRSI EVTGAMQNNL KNIDVRIPLG VLTCVTGVSG SGKSTLVNDI
IFKGIRRAKE LSAEKVGTHC ALTGHEYIHS VEHVDQSPIG KSSRSNPVTY LKIFDDIRQL
FSQTRLALAK GWKPGYFSFN IPGGRCETCA GEGTLRIEMQ FLADIEAVCD ECNGKRYKAD
TLEVTLNGLS IADVLDLTVS DAMDFFAGEK SILRKLRVLD EVGLGYIRLG QSSSTLSGGE
AQRLKLASFI VRADIEHTLF IFDEPTTGLH FDDIRKLIAC FDRLLLQNNT LLVIEHNPDI
IKQADWVIDL GPGAGDKGGE IVAVGSPEAI CRNSSSITGH HLAPWLDSTQ QNEIRD
|
|---|
| |