Gene Paes_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0571 
Symbol 
ID6460202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp614722 
End bp615255 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID642724570 
Producthypothetical protein 
Protein accessionYP_002015274 
Protein GI194333414 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.487342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA TTAAATCCAA AAGGATTGGT TTCAGGATCG ATATGACGCT GATGGTCGAT 
GTGGCATTTC TTCTGCTGAC CTTTTTTATG CTGACCACGA AGTTTCGTCC ACCCGAGCCG
GTAAAAGTTG ATATTCCTTC TTCTCATTCG GAACAGAAAG TTCCTGAATC GGGAATCCTC
ACCGTCACGA TCAGCGGTGA TAACGCGTAC TTCATGGGGG TCTCATCGCA GCCCGACAGA
GTGGCTCTTT TTGAGCGTGT TATCGGGCCA AAACTCAAGG CATCAGGTGC CGACCCTGCC
GCTGTCGAAG ATTCCCTGCA GCATTTCAAA CTTGCCGAGA GCTTTCCTGT CGATCGGGGA
GAAATTGAGA GGTTCGTCAT GACAGCCAGG GTCTCAAACC AGAAAATCCG TCCAGTCGTC
AAGGCGGATA TGAGTGCTGA TTTTGAGGCC GTTGATCATG TGCTGAAGGT GTTTAAGGAA
TCCAATATTC TTACCTTCAA CCTGGTAACC GCTCTCGAGA AGGAGGGAGG CTGA
 
Protein sequence
MSKIKSKRIG FRIDMTLMVD VAFLLLTFFM LTTKFRPPEP VKVDIPSSHS EQKVPESGIL 
TVTISGDNAY FMGVSSQPDR VALFERVIGP KLKASGADPA AVEDSLQHFK LAESFPVDRG
EIERFVMTAR VSNQKIRPVV KADMSADFEA VDHVLKVFKE SNILTFNLVT ALEKEGG