| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0536 |
|---|
| Symbol | |
|---|
| ID | 6459895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 578995 |
|---|
| End bp | 579888 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642724535 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_002015239 |
|---|
| Protein GI | 194333379 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.651244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA CTTCAATTTC CGGTTCGGCA GTGGCACTTG TCACACCGTT CAGACAGGAT
ACATCGATCG ATACCGATGC GCTGCGGCGC CTCGTGCAGT TCCATCTCGC CTCAGGCACC
GATATCCTCA TCCCCTGTGG CACCACCGGT GAATCACCAA CGCTCTGTCA GGAAGAACAG
GCAGCAATCA TCAGGATCGT CAAGGAAGAA GCCGGGAACC ATATCCTGGT CGCTGCCGGA
GCAGGCACCA ACGATACCCG CAAAGCAGTC GAACTGGCAC TCAATGCCCG GAAAGCAGGC
GCAGAAGCAA TTCTGTCCGT CGCTCCATAT TACAACAAAC CCTCGCAGGA AGGCTTTTAC
CAGCATTATC GTCATATAGC CGAAGCGCTC GATATTCCGG TTATTATTTA TAATGTGCCA
GGCAGAACAG GCAGCAATAT TGCCGCAGAA ACCATTCTCC GGCTTGCTTC GGATTTCCAG
AACATCGCAG CGGTCAAGGA AGCTTCAGAC AATATAGGCC AGATCATGGA GCTGCTTGCC
GATCGTCCGG ACCATTTTTC CGTTCTCACC GGTGAAGACA CACTCATACT GCCGTTCATG
GCAATGGGCG GTGATGGCGT TATTTCCGTC GCGGCAAATC AGGTACCTGC AGAGATCAAG
CAGCTCATCA CCCTTGTACA GGAAGGAAAC CTGCCGGAAG CAAGAAGACT CAATAACAGG
TTGCGTAAAC TCTTCAGACT GAACTTTATT GAAAGCAATC CTGTACCGGT CAAATATGCT
CTGTCATTGA TGGGAATGAT AGAAGAAGTC TATCGCCTTC CTCTCCTGGC TATGGAAGAA
AAGCATAAGA AAATCCTGAA ACAGGAACTC GAAACCCTGG GGCTGATCAG CTGA
|
|---|
| Protein sequence | MSNTSISGSA VALVTPFRQD TSIDTDALRR LVQFHLASGT DILIPCGTTG ESPTLCQEEQ
AAIIRIVKEE AGNHILVAAG AGTNDTRKAV ELALNARKAG AEAILSVAPY YNKPSQEGFY
QHYRHIAEAL DIPVIIYNVP GRTGSNIAAE TILRLASDFQ NIAAVKEASD NIGQIMELLA
DRPDHFSVLT GEDTLILPFM AMGGDGVISV AANQVPAEIK QLITLVQEGN LPEARRLNNR
LRKLFRLNFI ESNPVPVKYA LSLMGMIEEV YRLPLLAMEE KHKKILKQEL ETLGLIS
|
|---|
| |