Gene Paes_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0521 
Symbol 
ID6459205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp564996 
End bp565961 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content50% 
IMG OID642724520 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002015224 
Protein GI194333364 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCT ATATCTTCAG AAGACTGCTG GTGGCTGTTC CCCTGATTTT CGGTGTTCTC 
ACCCTGACCT TTTTTATTAT CAGGCTTGCC CCGGGCGATC CCGCTGCATT TTTCATTCAG
CCGGGAATCA GTCCCAATGT CGCCGAGCAG ATCAGAGAGC AATATGGTCT GAATGATCCT
GTTTACATCC AGTACTTCAA ATGGCTTGCC AATATTTTTC AGGGAGATTT CGGCAGAAGT
TTCAGCCGCG CGCAGCAGCC TGTCGTGGAG GTTATCGCCC AGGCGCTTCC GATAACGGTC
ACCATAGCAC TGTTGACGCT TATTGCCAAT TTTGTCCTTG GAATCGCCAT CGGTGTCATT
TCAGCAGTCA GGCAGAACAG CGTGCTTGAC CGGGTTCTCA CCGTCACAGC ACTGTTTTTC
TATTCCATGC CCGAGTTCTG GTTTGCGCTG ATGATGATTA TCATCTTTGC CCTGAAACTG
CAGATCTTTC CAGCTTCAGG ATTGAATGAA GTCGGCGCCG AATTTCTTGG CCCGGTCGGT
TTTGTTCTGG ACAGGATCTG GCATCTGGTG CTTCCCGTCA CGGTGTTGAG CATTAACGGC
GCCGCAGGCA TCGCCAGGTA TGTCAGAGGC AGTATGCTCG AGGTGATCCG TCAGGATTAT
ATCAGAACCG CAAGGGCAAA AGGACTTCCT GAAAAGGTTG TCGTACTCAA ACACGCATTG
CGCAACGCGC TTCTTCCGGT CATTACGCTC ATCGGCGGCT CACTGCCGTT TATTTTCAGC
GGCGCGTTGT TTATTGAGGT GATTTTCGCC TTTCCCGGAA TGGGGCGGGT CACCGTTGAG
GCAATTTTTG CCAGGGATTA TCCGTTAATT ATTGCCAATA CCTTTATTTC AGGTACGCTT
ATCATCTTTG GCAACCTGCT TGCAGATGTT CTGTATGCGG TTGTCGATCC AAGAATCAAG
CTGTAA
 
Protein sequence
MLLYIFRRLL VAVPLIFGVL TLTFFIIRLA PGDPAAFFIQ PGISPNVAEQ IREQYGLNDP 
VYIQYFKWLA NIFQGDFGRS FSRAQQPVVE VIAQALPITV TIALLTLIAN FVLGIAIGVI
SAVRQNSVLD RVLTVTALFF YSMPEFWFAL MMIIIFALKL QIFPASGLNE VGAEFLGPVG
FVLDRIWHLV LPVTVLSING AAGIARYVRG SMLEVIRQDY IRTARAKGLP EKVVVLKHAL
RNALLPVITL IGGSLPFIFS GALFIEVIFA FPGMGRVTVE AIFARDYPLI IANTFISGTL
IIFGNLLADV LYAVVDPRIK L