Gene Paes_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0504 
Symbol 
ID6459237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp542160 
End bp544154 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content53% 
IMG OID642724503 
Productacetyl-CoA synthetase 
Protein accessionYP_002015207 
Protein GI194333347 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR01217] acetoacetyl-CoA synthase
[TIGR02188] acetate--CoA ligase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGG ACAAAAACAC ATCACATCCG CAAGAATCCC CCGAAAACGA ATCGATCAGT 
TCCGTCCTGT CTGAAAAACG CAAGTTTCCT CCCCCGTCCG AGTTCTCAGA AAACGCTCAT
ATATCCTCAA TGGAGCAGTA TGAACAGCTC TATAGCCAAG CAGAGAAAGA TCCTGAAGCT
TACTGGGCAG GCGTAGCTGA GGAGTTCCAT TGGGAAAAAA AATGGGATTC GGTACTCGAA
TGGAATTCTC CCTATGCCAA GTGGTTCCCC GGCGCAACAA CAAACATCTG CTACAATGCC
GTTGACCGTC ATGTCAACAG CTGGAGAAAA AACAAGGCCG CCATTATCTG GGAAGGTGAA
GAGGGTGAAC AGCGGGTTCT CACCTACGGC GAACTCCACA GACAGGTCAG CAAGTTCGCC
AACGTCCTGA AAATTGCGGG CATCAAGCCT GGTGACAGAG TAGCCATTTA TATGGGGATG
GTGCCTGAAC TGGTGGTCGC CGTTCTTGCA TGCGCCCGTG TCGGAGCTGT CCACAATGTC
ATTTTCGCAG GGTTCTCCGC CCACGCCATT ACCGAAAGGG TCAACGACTC AAAAGCAAAA
CTGATCATCT GCTCCGACGG AACCCGCCGA CGCGGCAATA CGATCAATCT GAAAGACATC
GTTGACGATG CAATTGTCAA CACTCCCTCG GTCCGTAGCG TCATTGTCCT GAAAGTCACC
AATGAAGAGG TTACCATGCA TGACGGTATG GACCACTGGT GGCATGACCT CATGGGGCTG
GCCCTCGATC ATAACGATCC CGAGTTCGTC GATGCAGAGC ATCCGCTCTT CATTCTCTAT
ACCAGCGGAT CGACTGGAAA ACCGAAAGGA ATTCTCCATA CAACGGGCGG TTATATGGTT
CATGCAGCCA GCTCGTTCAG GTATGTCTTC GACATCAAGG ACGAAGACAT TTACTGGTGT
ACTGCCGATG TGGGCTGGAT TACCGGTCAC AGCTATCTGG TTTACGGTCC GCTGCTCAAC
GGTGCAACCC TGATGATGTA TGAAGGCGCA CCGAACTACC CGCAGTGGGA CCGCTTCTGG
GATATTATCA ACCGCCACAA AATCACCATT CTCTATACTG CTCCGACGGC GATACGGGCG
TTTATCCGCG CAGGTGACGA GTGGGTCAAC AAACACGACC TCAGCACGCT CAGACTTCTC
GGCACCGTTG GTGAACCGAT CAATCCGAAA GCATGGATGT GGTACCACTC CGTTGTAGGC
AAAGAAAAGT GTCCGATCGT CGACACCTGG TGGCAGACAG AAACCGGAGG CATCCTGGTC
TCGCCCCTTC CTGGAGCGAC CCCGACAAAA CCGGGCACGG CAACCCGTCC GCTTCCCGGT
ATCCTGGTCG ATGTCGTTCG TAAGGATGGC ACGCCCTGTA ACGCCAACGA AGGCGGCTAC
CTGGTCATCA AGAAACCATG GCCATCGATG CTTCGCACGA TTTACGGTGA CAATAAACGC
TATGAAGAGA CCTACTGGTC TGAATTCAAG GATATGTATT TCACCGGTGA TGGCGCCCGC
AAAGACGAAG ATGGCTATAT CTGGATCATG GGACGCGTCG ACGATGTTGT CAACGTCTCC
GGACACCGTC TTGGCACCAG CGAAGTAGAA AGCGCTCTCG TTGCCCACGA ATCTGTCGCC
GAAGCAGCTG TCGTCAGCCG TCCGGATGAG ATCAAGGGCA ACGCTCTGAT CGCATTCGTC
ACGCTCAAGG ATGAATATCA GGGCGACATG AAACTTCGCG AGGAGTTGAG AGCCCATGTT
TCCAAAGAGA TCGGCCCGAT AGCCAAACCC GACGAAATCA GATGGGCCCA GGGCCTTCCC
AAAACCAGAA GCGGCAAAAT CATGCGCCGA CTTCTGCGCG AACTGGCCTC AAGCAAAGAG
ATCAAGGGCG ATGTTACCAC GCTTGAAGAT TTCGGCGTGC TCGAACAGTT GCGCGGACAG
GAAGACGAAG ATTAA
 
Protein sequence
MATDKNTSHP QESPENESIS SVLSEKRKFP PPSEFSENAH ISSMEQYEQL YSQAEKDPEA 
YWAGVAEEFH WEKKWDSVLE WNSPYAKWFP GATTNICYNA VDRHVNSWRK NKAAIIWEGE
EGEQRVLTYG ELHRQVSKFA NVLKIAGIKP GDRVAIYMGM VPELVVAVLA CARVGAVHNV
IFAGFSAHAI TERVNDSKAK LIICSDGTRR RGNTINLKDI VDDAIVNTPS VRSVIVLKVT
NEEVTMHDGM DHWWHDLMGL ALDHNDPEFV DAEHPLFILY TSGSTGKPKG ILHTTGGYMV
HAASSFRYVF DIKDEDIYWC TADVGWITGH SYLVYGPLLN GATLMMYEGA PNYPQWDRFW
DIINRHKITI LYTAPTAIRA FIRAGDEWVN KHDLSTLRLL GTVGEPINPK AWMWYHSVVG
KEKCPIVDTW WQTETGGILV SPLPGATPTK PGTATRPLPG ILVDVVRKDG TPCNANEGGY
LVIKKPWPSM LRTIYGDNKR YEETYWSEFK DMYFTGDGAR KDEDGYIWIM GRVDDVVNVS
GHRLGTSEVE SALVAHESVA EAAVVSRPDE IKGNALIAFV TLKDEYQGDM KLREELRAHV
SKEIGPIAKP DEIRWAQGLP KTRSGKIMRR LLRELASSKE IKGDVTTLED FGVLEQLRGQ
EDED