Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0311 |
Symbol | |
ID | 6460365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 331973 |
End bp | 336091 |
Gene Length | 4119 bp |
Protein Length | 1372 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724307 |
Product | type I site-specific deoxyribonuclease, HsdR family |
Protein accession | YP_002015015 |
Protein GI | 194333155 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.220801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAC CCTCCGAACA TAAAACCGTC CAGTCCCGAA TCCTCGCATA CGCCGAGGCC ATCGGCTGGA CCGTTGTATT TCGTGAGGAA GCGGAGAAAC GGAGGGCGGG TTTTCCAACC CGCCATTACA TTCCAACAGG AACAGTAACG GAAGGTTTTC CAACCCGCCA TTACATTCAA TGTGGCAAGC AAGAAAATGG CGGACAGGAA TGTCCGCCCT CCGTTAAATC ATTGTCCCTT TTCTTCGACG ACCTGCTTGA CGCGAAGGTT CGGGAGTTCA ATCCTTGCTA TGCCGAGGCG GAAGGAGCGT TGCTTGGGCA GTTCCGGCAT TTGCATGCTG ACATCTACGG CAATCGGGAG TTCGTGGAGC ATCTGCGTAA CCGGGGGAAG TTCTTCGATC ACGAGGAGAA GCGGGAGCGC GACCTGATCC TGATCGATTA CGAGAATCCT GAGCGGAACG TGTACGAAGT GACCGAGGAG TGGGCCTATC ATAACGGGCA GTACGGTACT CGCGAGGATA TTGTCTTTCT CGTCAACGGC ATTCCCGTGC TGATGATCGA GTGCAAGAAT GCCACCAGGG ATGAGGCGAT TGCTTTGGGG ATAGACCAGA TCCGCCGTTA CCATCGCGAG ACACCAGAAC TGTTCGTTCC CCAGCAGCTT TTCACCGTTA CCGATGCCAT CGGCTTTTCG TATGGAGCCA CTTGGAACAC CGTGCGCCGT AACATCTTCG AGTGGAGAAC GGAGGGCGGA CTTTCCAGTC CGCCATTACA TTCTGATGTG AATGAAGGAC TTTCCAGTCC GCCATTACAT TCTGAATTGG AAAGCGGATC AGAAAATTCG CCATTGCATG TGAAAAGAAA AGAGGGGGGA AATGGCGGGT TGGAAAACCC GCCCTCCTTT CTTGACCCGG AGAGAGAGAT TGGCATGACG CTGCGTCGGT TGCCGCATTG GCAGCAGGGT GATGTGTGGG TCTTTGTGAC ATGGCGGCTG GCGGATTCTC TGCCACAGTC GAAACTGGAG GAGTGGAAAG AAGAGCGGGA GATCTGGCTT TCGAAACATC CTGAGCCATG GGATGAGAAA ACCGAAGAAG AGTATCATGA ACGCTTTTCG CGTCAGATCG ACGATTGGCT CGATCAGGGC CGTGGTTCGT GTCTGCTAAA AGATCCTGAA AATGCGCAGA TCGTTGCCGA TGCGTTACGG CATTTTGACG GAGAACGCTA TCAGCTGGCT TCGTTCGTGG TGATGCCGAA TCATGTGCAC GTGTTGTTCT GTCCGTCCGG AACGCATTCG CTCGCCGGGA TTCTGAAATC CTGGAAGGGA TTCAGCGCCC GTGAGATCAA CAAGCGATCG GGAAAGACGG GATCGTTCTG GCAGGAAGAG TATTGGGACC GTTTGATTCG AAGTGAGAAG CACTTTTTCA GGGTGGCAAA GTACATCCGT GAGAATCCAA TAAAGGGGGG CGGGTTTTCC AACCCGCCAT TACATTCTTA TTTTGAAAGA GGATTAGAAA ACCCGCCATT ACATTCTGAT GTGAATGCAG GACTTTCCAA CCTGCCATTC TATTACGAAT GCGAATTGCT GTTCGGAAAA AATGGCGGAC AGGAATGTCC GCACTCCGTT GAAGATAATG GCGGGTTTGA AAACCCGCCC TCTTTTCAAG AAAAGGCCAG GCTGGAAGCA TTGCCATTAC AGTCAAAAGA AGTTCAAGAA AATGGCGGAC AGGAATGTCC GCCCTCCTTT CCCGGTCGTC TTGAGGCCAA GGTCAAAACC TTCTGCGCTA TCCCGCAGGT GCTCGCCTTC CTGAAGGAGT ACATTGTCTT TGCCGAAAAG GACGAGGAGC TGAACAAGTA CATTCTGCGC CAGCACCAGA CCGGTGCGGT GGATGCATCC GTCAATCGGG CACTTGATCC TGTCCGTTCC CGTGGTCTCG TCTGGCATAC GCAGGGGAGC GGCAAGACCT TCACGATGAT CAAGGCGGCT GAACGGCTCT TTCGTGCGCC AGAGGCAGAC AAGCCGACCA TCCTTCTGAT GATCGACCGC AACGAGCTGG AAGACCAGAT GCTCAAGAAT ATCTCCGCGC TCGGTTTGGG CAATCTGGAG CATGCAGGAA GCATCAAGCG GCTCAACAAA CTGTTGCGTG ACGACTATCG GGGCATCATC GTCACGATGA TCCACAAGTT CCGGGATATG CCGGGGAATA TCAATACCCG GTCGAACATC TACGTCCTGA TCGACGAAGC ACACCGTACT ACAGGCGGCG ATCTTGGCAA CTACCTCATG GCCGGTCTGC CCAACGCCAC CTTCATCGGT TTTACCGGTA CGCCGGTGGA CAAGACCGTT TACGGTAAGG GCACCTTCAA GACCTTCGGC TGCGAGGACG ACAAAGGGTA TCTGCACAAG TATTCCATCG CCGACAGCAT CGAGGACGGC ACCACGCTGC CGCTATACTA CCAGCTTGCG CCCAACGACA TGCTCGTCCC GCACGAGACA CTGGACAAGG AGTTTCTCTC CCTTGTCGAA GCTGAGGGAG TCGCTGACAT CGAAGAGTTG AACAAAATTC TCGACCGGGC AGTGAACCTG AAGAACTTTC TCAAAGGCAG GGAACGGATC AAGAAAGTCG CGCAGTTTGT TGCAGGGCAC TACCTCGCCA ACGTCGAACC TCTCGGCTAC AAGGCTTTCC TTGTCGGGGT AGACAGGGAG GCCTGCGCCC ACTACAAGCA GGCCCTCGAC CAGTTCCTGC CGTCCGATTA TTCCCGGGTG GTCTACACCG GCAACAATAA CGACTCCGTC CTGCTCAAGA AATTTCATCT CGACCAGAAA CAGGAACGGC AGATCCGCAA AAGCTTCGGC AAACTCGCAG AGCAGCCGAA GATTCTCATC GTCACCGAGA AACTTCTTAC CGGATTCGAT GCGCCTCTGC TCTACGCCAT GTATCTCGAC AAGCCGATGC GCGACCATAC CCTGTTGCAG GCCATCGCAA GGGTAAACCG TCCCTACGAG AACGAAGCGC AGGAGATGGT AAAGCCCCAC GGTTTTGTGC TCGATTTTGT CGGCATTTTC GACAAACTCG AAAAAGCTCT TGCCTTCGAC AGCAAGGAGA TCAACGCCAT CGTCAAGGAT ATCAGTCTTC TGAAGGCACT CTTCAAAAGC AAGATGGAGG CTATAGGAGG GCGGACTTTC CAGTCCGCCA TTGGATTACA AACGGCGAAC AGAGGAAACG GGCATTGGAT TTCGAATGAG GATTCTGAAT GTAATGGCGG ACTGGAAAGT CATGAGGATA AATGTAATGG CGGACTGGAA AGTCCGCCCT CCTTTACGTT CAATGATAGG GATGTCGATA ATCTGATCGA GCATTTCCGT GATCCGGAGC GGCGGAAAGC GTTTTTCAGG GAGTACAAGG AGATCGAGAT GCTCTACGAG ATCATCTCAC CGGATGCGTT TCTCCGGCCA TTTATTGACA ACTATGCGAT GCTTTCGGCA ATCTACAATG TGGTTAGCAA GGCCTATACG AAGCGCATTC AGGTCGATCG TGATTTCCAG CGCAAGACCA GCATGCTGGT GCAGCAGCGG GTCGGCAGTT ACGGAGTCGG AGAGTTGCAG GGCGTGGTGA AAATAGATGC GAACGCCATC GACATCATCA ATGCCCAGGC TGGCGGGGGC GTAACGAAGG TGATCAATCT TATCAAGAGT ATTGAAAAGA TCGCGGAGGA GCAAAGCGAC GATCCGTTTC TGATCGCCAT GGCCGAAAGA GCACAAGCCG TGCAGGAGCG TTTCGAGAAC CGCCAGACCA CGACAGCCGA AGCCCTGGGA AAGCTTATCC AGGAGGTCGA GGCCAACGAG GCCCGCAAAA AAGAGCAGGC GGAAAAAGGA TTTGACGGAC TGACTTACTT CGTCTACCGG ACGCTGCTCG ACGAGGATAT AAATAATCCC GAAGAGGTCA GCCGGAAGAT CAAGGCGGTA TTTCTGGAAT ATCCCAACTG GCAGAAAAGC GGCGCGGCAA TGCGTGAGCT GCGAAAAAAG ATCACTTTTG CGCTTTTTAC TCAATCGGAC GACCTTGACC GGGTCACTGG CATTGTGGAC GCCCTGTTCA GTTTGCTGGA ACGGGCAAAC GGGATTTGA
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Protein sequence | MPTPSEHKTV QSRILAYAEA IGWTVVFREE AEKRRAGFPT RHYIPTGTVT EGFPTRHYIQ CGKQENGGQE CPPSVKSLSL FFDDLLDAKV REFNPCYAEA EGALLGQFRH LHADIYGNRE FVEHLRNRGK FFDHEEKRER DLILIDYENP ERNVYEVTEE WAYHNGQYGT REDIVFLVNG IPVLMIECKN ATRDEAIALG IDQIRRYHRE TPELFVPQQL FTVTDAIGFS YGATWNTVRR NIFEWRTEGG LSSPPLHSDV NEGLSSPPLH SELESGSENS PLHVKRKEGG NGGLENPPSF LDPEREIGMT LRRLPHWQQG DVWVFVTWRL ADSLPQSKLE EWKEEREIWL SKHPEPWDEK TEEEYHERFS RQIDDWLDQG RGSCLLKDPE NAQIVADALR HFDGERYQLA SFVVMPNHVH VLFCPSGTHS LAGILKSWKG FSAREINKRS GKTGSFWQEE YWDRLIRSEK HFFRVAKYIR ENPIKGGGFS NPPLHSYFER GLENPPLHSD VNAGLSNLPF YYECELLFGK NGGQECPHSV EDNGGFENPP SFQEKARLEA LPLQSKEVQE NGGQECPPSF PGRLEAKVKT FCAIPQVLAF LKEYIVFAEK DEELNKYILR QHQTGAVDAS VNRALDPVRS RGLVWHTQGS GKTFTMIKAA ERLFRAPEAD KPTILLMIDR NELEDQMLKN ISALGLGNLE HAGSIKRLNK LLRDDYRGII VTMIHKFRDM PGNINTRSNI YVLIDEAHRT TGGDLGNYLM AGLPNATFIG FTGTPVDKTV YGKGTFKTFG CEDDKGYLHK YSIADSIEDG TTLPLYYQLA PNDMLVPHET LDKEFLSLVE AEGVADIEEL NKILDRAVNL KNFLKGRERI KKVAQFVAGH YLANVEPLGY KAFLVGVDRE ACAHYKQALD QFLPSDYSRV VYTGNNNDSV LLKKFHLDQK QERQIRKSFG KLAEQPKILI VTEKLLTGFD APLLYAMYLD KPMRDHTLLQ AIARVNRPYE NEAQEMVKPH GFVLDFVGIF DKLEKALAFD SKEINAIVKD ISLLKALFKS KMEAIGGRTF QSAIGLQTAN RGNGHWISNE DSECNGGLES HEDKCNGGLE SPPSFTFNDR DVDNLIEHFR DPERRKAFFR EYKEIEMLYE IISPDAFLRP FIDNYAMLSA IYNVVSKAYT KRIQVDRDFQ RKTSMLVQQR VGSYGVGELQ GVVKIDANAI DIINAQAGGG VTKVINLIKS IEKIAEEQSD DPFLIAMAER AQAVQERFEN RQTTTAEALG KLIQEVEANE ARKKEQAEKG FDGLTYFVYR TLLDEDINNP EEVSRKIKAV FLEYPNWQKS GAAMRELRKK ITFALFTQSD DLDRVTGIVD ALFSLLERAN GI
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