Gene Paes_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0296 
Symbol 
ID6459675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp315580 
End bp317463 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content52% 
IMG OID642724292 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002015000 
Protein GI194333140 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.043931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0310539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA CTTCAATCTT AAACAACAAA GATATGGTAA CTTCAAAAAC TAGCGTGTCC 
GTTCTTTTTG CGGGCGACTC TGGTGACGGT ATGCAACTTA CCGGTACCCA GTTTGCGAAC
ACGGTCGCGG TCTACGGTAC CGACCTTAAT ACGTTCCCGA ACTTCCCGTC AGAAATCCGC
GCTCCTGCAG GCACCATCTC CGGTGTTTCC GGCTTCCAGC TTCAGTTTGG CAGCAAGGCG
GTCTATACCC CTGGCGCTAA ATTCGATGTC ATGATCGCGA TGAATGCAGC GGCTCTTAAA
GCCAACCTGC ATAACCTGCA CCATGGCGGT CTCATTATCG CCAATACCGA CGGGTTCGAT
GCAAAAAACC TCAAGCTGGC TGGTTATGGA GAAGAGAACA ATCCGCTTGA AAACGGCACC
GTAAAAGATT ATACGGTTTT CGAGGTGCCT GTTGTCTCAC TGACCCGTGC GGCGCTTGCC
GATACAGGAC TCAGCACAAA AAACATAGAT CGATGCAAAA ATATGTTTGT GCTGGGCATT
CTCTACTGGC TCTACAGCCT TCCAATCGAC ACCACGATTG AAACCCTCCG CACCAAGTTC
AGAAAAAAAG CTGACGTTGC TGAAGCAAAT ATCAAAGCAG TTAAAGCCGG TTACAATTTC
GGTGATGAAA CAGAGATGTT TTCACAGCAC GGCCGTTACA GTGTCGACCC CGCAGAAAAG
AAACCCGGTG TCTATCGCCG TGTTACAGGA AACGAAGCTT CTGCTATCGG CCTGACTGCA
GCCGCAAAGA AAGCCGGTCT TCAGCTCTTT CTGGGATCCT ATCCGATTAC CCCTGCGTCT
GAAATCCTTC AGACCCTTGC AGGACTCAAA AAATGGGGTG TCAAGACATT CCAGGCAGAA
GATGAAATTG CAGGCGTTCT GACAAGTATC GGCGCATCAT ACGGCGGTGC ACTTGCCGCG
ACCAACACCT CAGGACCGGG CCTTGCGCTG AAAGCCGAAG GTCTCGGACT GGCCATGATA
CTCGAAGTCC CTCTGGTAGT CATAAACGTG CAGAGAGGCG GACCGTCAAC CGGCCTGCCG
ACCAAGCCCG AACAGTCGGA CCTCTTTATC GCCATGTACG GCCGTCACGG CGACGCTCCG
GTTCCGGTTA TAGCCGCAAC TTCACCGGTA GACTGTTTCT ATGCCGCCTA TGAAGCCGCA
AAAATCGCGG TAGAATATAT GACGCCTGTC ATTTGCCTTA CCGATGGCTA TCTCGCATTG
AGTTCCGAAC CCATGCGGGT TCCTTCACCG GACGAACTGG CTTCCATTAC AGCGAAATTC
GCGAAAGAAC GAAAAGCCGA CGATCCCCCC TATCTTCCGT ACAAGCGCGA CGAACGTTGC
GTGCGCGAAT GGGCCAAGCC CGGCACTCCA GGCCTTGAGC ACAGAATCGG TGGCCTTGAA
AAAGAGAATG AAACCGGTAA CGTCTCGCAC GATCCTGAAA ACCATGCACT GATGACCCGA
CTTCGTGCAG AAAAAGTAGA ACGTGTCGCC GATATCATTC CTCCGCTCGC GATCGATAAC
GGGCCTGAAA AAGGCGATCT GCTCGTCCTT GGCTGGGGCT CTACCTACGG TGCGATCAAA
ATCGCGGTTG AACAGGCCAT CGACAAAGGC TATAACGTTG CTCATGCGCA TCTGCGCCAT
CTCAATCCAT TCCCGAAAAA TCTCGGAGAG GTTCTTGGCA ACTACAAAAA GATTCTCATG
CCTGAAAACA ACAGCGGCCA GCTCATTCAT ATGATCAGGG ACAAGTTCCA GATCGAGCCT
GTCGGCTTCA GCAAGGTTGA GGGTCTGCCG TTCAACGAGA TGGAAATCGA AGCTAAAATC
ACTGATATTT TAAAGGAGCT TTAA
 
Protein sequence
MSDTSILNNK DMVTSKTSVS VLFAGDSGDG MQLTGTQFAN TVAVYGTDLN TFPNFPSEIR 
APAGTISGVS GFQLQFGSKA VYTPGAKFDV MIAMNAAALK ANLHNLHHGG LIIANTDGFD
AKNLKLAGYG EENNPLENGT VKDYTVFEVP VVSLTRAALA DTGLSTKNID RCKNMFVLGI
LYWLYSLPID TTIETLRTKF RKKADVAEAN IKAVKAGYNF GDETEMFSQH GRYSVDPAEK
KPGVYRRVTG NEASAIGLTA AAKKAGLQLF LGSYPITPAS EILQTLAGLK KWGVKTFQAE
DEIAGVLTSI GASYGGALAA TNTSGPGLAL KAEGLGLAMI LEVPLVVINV QRGGPSTGLP
TKPEQSDLFI AMYGRHGDAP VPVIAATSPV DCFYAAYEAA KIAVEYMTPV ICLTDGYLAL
SSEPMRVPSP DELASITAKF AKERKADDPP YLPYKRDERC VREWAKPGTP GLEHRIGGLE
KENETGNVSH DPENHALMTR LRAEKVERVA DIIPPLAIDN GPEKGDLLVL GWGSTYGAIK
IAVEQAIDKG YNVAHAHLRH LNPFPKNLGE VLGNYKKILM PENNSGQLIH MIRDKFQIEP
VGFSKVEGLP FNEMEIEAKI TDILKEL