| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0275 |
|---|
| Symbol | |
|---|
| ID | 6460733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 289213 |
|---|
| End bp | 289884 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642724267 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002014979 |
|---|
| Protein GI | 194333119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.106395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000259361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CTGTAAAAAA GCAAGAGACC GCATCCGGTC CGGCCAAGGC AAAACCGGCG
GCTCCTAAAG CAAAAGCTGA TGCCCCGAAA GGGAAACCTG CTCCGAAAGC TGGTGGCGCA
TCATCTCTTG TCAAAGGACG TCTCGATTCT CTGGATGTCA ATCTCGGGCG TACAGGTAGA
AGAATGGAAT CCGCGCTTCC GGTTGTCAGG CCAAAACCTA AAGCTGCCCC GAAGCTGGCA
CCGAAAGGCG CTCCCAAGGG TGCTCCGGCA GGAAAAGCTG TCCCGAAAGG CGCTCCTGCA
GCAAAAGGTG CCCCCGCGGC AAAGCCTGCA GCTAAACCGA TTGCCAAGAA AGCACCGAGA
CCCAAAAAGC ACTACTTTAT TCTCGAAAAT CTTTGTGTCG GTTGCGGACT CTGCCTTGAT
ACATGTCCGC CGAAAGTTAA CGCTATCGGC TACAAATTCT ACGGAGATGT GCAGGAGGGT
GGCTTCAGGT GCTATATCGA TCAGGATGCC TGTATTTCCT GTGCCGCCTG TTTCTCATCG
GACGAGTGTC CTTCAGGTGC TCTTATTGAA ATACTTCCAA CCGGCGAAGT GCTTGATTTT
ACCTATACCC CGCCTGAGAG GCTCGATTTT GATCTCAGAT TCCTTCACCG ATTCCACAAG
GAGTCCCGGT AA
|
|---|
| Protein sequence | MADPVKKQET ASGPAKAKPA APKAKADAPK GKPAPKAGGA SSLVKGRLDS LDVNLGRTGR
RMESALPVVR PKPKAAPKLA PKGAPKGAPA GKAVPKGAPA AKGAPAAKPA AKPIAKKAPR
PKKHYFILEN LCVGCGLCLD TCPPKVNAIG YKFYGDVQEG GFRCYIDQDA CISCAACFSS
DECPSGALIE ILPTGEVLDF TYTPPERLDF DLRFLHRFHK ESR
|
|---|
| |